Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01886 ATGAAGACCCGTTCATCCAAATGGGTTATTTGCGTCTTGGTCACTCTCTTCTGCTTCCTCGCGTGCTTCAAAATCGAAGCCAAAACTATCGACCCTTACAAGGTTCTTGGGGTTGATAAGAATGCAAGTCAGAGGGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTTCAGTATCACCCTGACAAGAACAAGGCCAAGGGTGCACAAGAGAAGTTTGCTCAGATTAACAACGCGTATGAGATTTTATCTGATGAGGAGAAAAGGAAGAATTATGACATGTATGGTGATGAGAAAGGACATCCCGGATTTGAAGCTGGCCAAGCTGGAGGTCAGGGTGGATATTCTTATTTCACAGGTGGTGGACCGGGACAAAGCCAGTTCAACTTCAGACCAGGGGACTGGCAGGGTATGGGTGGGCAAGGAGGAGGATCGAAGTCATTCTCCTTTTCCTTTGGTGGGCCTGGTGGTGGTGGGTCCGGTGGATCTGGCGGATCTTTTGGATTCGATTTGAATGATATTTTTGGTAGTTTTTTTGGCCGTGGCGGAGGAGGAGGTGGTGGGAGTCAGTTTGGGGGTTTTGGCAGCGGTTCAACTGGTTCTCATTTTGGAGGTTTTGGTAGTTCAACTGGTTCTCAATCTGCGTCCAAGAAATCCTCTAAAAGCTTTAAAGCCATAAATTCACGAGTATATGAGAAAGAAATATTTGATCAGGGGATGACGTGGATTTTGTTAGCTTATACACCATCATTGAAGGGGATCCAGCACTTCGAATCTGTCTCTGAGGAGACTTCCAGTTCATTGCAAGGGGCATTGAAGGTTGGAAGTATTAATTGTGAAAAGGAAATATCATTCTGTAAGGAGATTGGTGTGAATCTGCGCAAAGCTCCACGGCTTTTTGTTTATTCTTACAAGGAGAATGAAAAGGGTTCTCTGGTTGAGTATACTGGTGACTTGTCTGTTAAGGATTTGAAGGCTTTTTGTCAAGAACACTTGCCTAGGTTTTCCAAACGGACTGACGTGAAATCTCTTGATCAATTAAGCACTACTGGAAAGTTGCCTAGGGTGATGCTTCTCTCAACCAAAAAAGACACTCCTGTAATCTGGCGTGTGCTTAGTGGCTTGTATCACAAGCGCTTGGCATTCAATGATGCACAGGTTCAAGATGTTTCTGATCCAAGAGTGAAAAAGTTAGGAGTTGATGGACTTCCAGCTATTGTGGGTTGGCTACCTAATGGAGAGAAGCGCATTTTGAAATCAGGGATTTCTGTAAAAGATTTGAAATCTGCAGTTCTTGATCTTAGTAGCCTACTTGATAGTTTTGAAAAATTATGTAAAAAGGAAGCATCTGGGCATGCTACGAAGACACAAACTGATTCTGAAGAGGGACACATACAGTTGCTTTCTAAGTCTAACTTTGAGGAGCTATGTGGTGATAAAGCTCCGGTATGCATCATTGGTGCCTTCAGGTCTTCTAAAGCCAGAGGAAAGCTAGAGTTAATTCTCTCTCAGGTCTCCCAGAAATCACTTTCAAGGCGACCAAATCAAGGAGCAAGCTCTAGGGATTCAATCTCCTATGCGCTCTTAGATGCTGCAAAGCAAGAATCATTTCTAAAAGCATTCAACAAGACAGATTACAAGTCATCAGATAAATTGTTGATCGCCTACAAGCCTAGGAGAGGTAAATACACTGTATTTAAGGGTGATATGACAATGGAGCAGGTTGAGAATTTCATCAGCTCAGTCCTCAGTGGAGATATACCCTTCAGGGAAACACAAAATAAACCTCTACTCAAGTAG 1797 0.4335 MKTRSSKWVICVLVTLFCFLACFKIEAKTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEEKRKNYDMYGDEKGHPGFEAGQAGGQGGYSYFTGGGPGQSQFNFRPGDWQGMGGQGGGSKSFSFSFGGPGGGGSGGSGGSFGFDLNDIFGSFFGRGGGGGGGSQFGGFGSGSTGSHFGGFGSSTGSQSASKKSSKSFKAINSRVYEKEIFDQGMTWILLAYTPSLKGIQHFESVSEETSSSLQGALKVGSINCEKEISFCKEIGVNLRKAPRLFVYSYKENEKGSLVEYTGDLSVKDLKAFCQEHLPRFSKRTDVKSLDQLSTTGKLPRVMLLSTKKDTPVIWRVLSGLYHKRLAFNDAQVQDVSDPRVKKLGVDGLPAIVGWLPNGEKRILKSGISVKDLKSAVLDLSSLLDSFEKLCKKEASGHATKTQTDSEEGHIQLLSKSNFEELCGDKAPVCIIGAFRSSKARGKLELILSQVSQKSLSRRPNQGASSRDSISYALLDAAKQESFLKAFNKTDYKSSDKLLIAYKPRRGKYTVFKGDMTMEQVENFISSVLSGDIPFRETQNKPLLK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01886 598 Coils Coil 65 85 - -
Adu04g01886 598 Gene3D Glutaredoxin 463 588 - -
Adu04g01886 598 PANTHER DNAJ PROTEIN ERDJ3A 11 597 - -
Adu04g01886 598 PRINTS DnaJ domain signature 33 51 IPR001623 -
Adu04g01886 598 PRINTS DnaJ domain signature 51 66 IPR001623 -
Adu04g01886 598 PRINTS DnaJ domain signature 67 87 IPR001623 -
Adu04g01886 598 PRINTS DnaJ domain signature 87 106 IPR001623 -
Adu04g01886 598 PANTHER DNAJ PROTEIN ERDJ3A 11 597 - -
Adu04g01886 598 ProSitePatterns Nt-dnaJ domain signature. 72 91 IPR018253 -
Adu04g01886 598 CDD DnaJ 31 84 IPR001623 -
Adu04g01886 598 Pfam DnaJ domain 31 92 IPR001623 -
Adu04g01886 598 SMART dnaj_3 30 87 IPR001623 -
Adu04g01886 598 Gene3D DnaJ domain 23 106 IPR036869 -
Adu04g01886 598 Gene3D Glutaredoxin 208 330 - -
Adu04g01886 598 SUPERFAMILY Thioredoxin-like 224 332 IPR036249 -
Adu04g01886 598 SUPERFAMILY Chaperone J-domain 19 98 IPR036869 -
Adu04g01886 598 ProSiteProfiles dnaJ domain profile. 31 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01886 Adu-Chr4 94750483 94754719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01886 33 94 C2H2 Transcription Factor Family AT1G74250 42.647 3.14e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01886 - - adu:107484989 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01886 04 94750483 94754719 Adu04g01886 04 94750483 94754719 ECH