Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01855 ATGGAAAGTCATCATCTCCATCATCATCATCATCAACAACAATACCCACCGCCACAACGTCATAATATTAGTGCAGCAACAACAACGAGTGCAGGAACTAATAACAACGTTGTGGTTGTTGATGTGACAGGAGATAGTAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTCCTAATGATCCGTGCAGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGCTCTGGGAAGTCATCTCCAACACCATGAAAGAAAAGGGTTACCATCGAAGCGCTGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGTTATAAGGGATGTGAAACGATGGAGGCAGAAGCAATGAGGCAGCAATTCCCATTCTACAACGAGCTTCAAGCTATCTTCACCGATAGAATGCAGAGGATGCTTTGGGCCGAAACAGAAGGCGGAGGCGGAGGAGGAGGTTCTTCTAATAACAAGAAGAAAGCTGCGACAGCGCAGCTGTCTTCGGACGACGAAGAAGAGGAAGAGAGCGAATTAGGAGATCCTCAACAAAAGAATGTAAAGAGAAAGAAAAGATTAAAGAAGGTTAAGAGGGTGGAAGATAGTGGTGGTGCGAGTAATTTGAAGCATCTGAAGGGGATTCTGGAGGAGTTTATGAGGCAACAGATGGAGATGGAGGCGCAATGGATGTCGGTGTTTGAGGCGAGGGAGAATGATCGGAGGTTGAAGGAGTTGGAATGGAGGCAGACAATGGAGGCTTTGGAGAATCAGAGGATGATGATGGAGCAGAGATGGAGGGAGAGTGAAGAACAATGGAGGATTAGGGAAGAAGCTAGGGCTCATAAGAGAGATGCTCTTATCACTGCACTTCTCAACAAGCTTTCAAGACAACAAGATCAATAA 906 0.4603 MESHHLHHHHHQQQYPPPQRHNISAATTTSAGTNNNVVVVDVTGDSRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNTMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEAEAMRQQFPFYNELQAIFTDRMQRMLWAETEGGGGGGGSSNNKKKAATAQLSSDDEEEEESELGDPQQKNVKRKKRLKKVKRVEDSGGASNLKHLKGILEEFMRQQMEMEAQWMSVFEARENDRRLKELEWRQTMEALENQRMMMEQRWRESEEQWRIREEARAHKRDALITALLNKLSRQQDQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01855 301 Gene3D - 51 112 - -
Adu04g01855 301 MobiDBLite consensus disorder prediction 1 30 - -
Adu04g01855 301 Coils Coil 245 272 - -
Adu04g01855 301 MobiDBLite consensus disorder prediction 1 15 - -
Adu04g01855 301 MobiDBLite consensus disorder prediction 146 203 - -
Adu04g01855 301 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 2 298 - -
Adu04g01855 301 Pfam Myb/SANT-like DNA-binding domain 50 134 IPR044822 -
Adu04g01855 301 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Adu04g01855 301 PANTHER - 2 298 - -
Adu04g01855 301 CDD GT1 49 114 - -
Adu04g01855 301 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01855 Adu-Chr4 93136645 93138278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01855 7 297 Trihelix Transcription Factor Family AT2G38250 52.577 1.09e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu04g01855 Myb_DNA-bind_4 5.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01855 - - aip:107637926 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01855 04 93136645 93138278 Adu04g01855 04 93136645 93138278 ECH