Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01851 ATGGCAGAATCGCAAGAAGAACGTGTTTCAAGCGAGGATCCTCCTTTATGCACTTCACCTAGCCAAAATTCATTAATGGAGGTCGATATAGTGGAACCGCTAGATTGTGTAGCCTCTGACGTTTCAGAAAATTTATCATACGAACAAGAAAACTTAGCCGGCGATGTCGCAGGCCATGGTCACAAGTCGAACAAAGCCACGCAATTGTCAGATGTTACAGATGTTGGAAGTGAAGAGATGGAGCTTGTTGATGAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTACAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAAGCTATACACTGTAATCGCGACGGGATCCGTGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAATGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGATTTTGCTCaagGAGCTTCGTTGTGAGTGCAATCTTTTTGAGAGTTCAGGTGTGTTGTGCTGTCACTGCCTTGAAGTTTTCCATTCATATAAAGGTTACAAAGTACCTTCATGTTATGTTCTCCCTcgatggagcaagaagataaagcgcaaacatacgtatatcaaaagtagccatgatgTCAGTCGGTCAGATGAGAGTCATGTTGCATTCAGAGGACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCGTCGGTGACGATGAAGAAACAACATTGCTGCATGTTGCTTTGGAAGAAACAATGGCCAAGTTGGCTGCGCACCGTGCCAAAAAGAGGTCCGAGAGCGTGTCAAAGACCCAGACGAACATTGGCTCACAGAGTTCGAACGATGTCGGTGTTGATGACACCCAAGGCCCATCAAATGTCACCACAAAGGGGAGGCCAAAGAGTAAGAGGCTCGGCGCTGCCCTTGAGAAGTCCTTCAAGAATTCAAGGCGGAGAAAACAAAAGAATTCATCCCCGGTAGATGTTTGGCTTAATCTCAACTTTGTGGTTCGTCCACACGCATTTCAAGATATACACCATGATTTTGTTGCTGGCCTAAATGTCCCCGAACAAGCTGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACAGAAAGTAG 1155 0.4251 MAESQEERVSSEDPPLCTSPSQNSLMEVDIVEPLDCVASDVSENLSYEQENLAGDVAGHGHKSNKATQLSDVTDVGSEEMELVDEMAHDFYVTYAKKAGFTTKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKAMIYVKFDKDVQDWILLKELRCECNLFESSGVLCCHCLEVFHSYKGYKVPSCYVLPRWSKKIKRKHTYIKSSHDVSRSDESHVAFRGLCAHFYNVAQEFVGDDEETTLLHVALEETMAKLAAHRAKKRSESVSKTQTNIGSQSSNDVGVDDTQGPSNVTTKGRPKSKRLGAALEKSFKNSRRRKQKNSSPVDVWLNLNFVVRPHAFQDIHHDFVAGLNVPEQAGGFMSLLSSFNRK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01851 384 Pfam FAR1 DNA-binding domain 89 164 IPR004330 -
Adu04g01851 384 PANTHER OS03G0843700 PROTEIN 167 280 - -
Adu04g01851 384 PANTHER OS03G0843700 PROTEIN 87 158 - -
Adu04g01851 384 MobiDBLite consensus disorder prediction 272 318 - -
Adu04g01851 384 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 167 280 IPR031052 GO:0006355
Adu04g01851 384 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 158 IPR031052 GO:0006355
Adu04g01851 384 ProSiteProfiles Zinc finger SWIM-type profile. 151 193 IPR007527 GO:0008270
Adu04g01851 384 MobiDBLite consensus disorder prediction 280 311 - -
Adu04g01851 384 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01851 Adu-Chr4 92917141 92921249 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g01851 FAR1 2.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01851 - - aip:107640004 380.563