Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01844 ATGGGTTCCACTCGCTCAGATGGCTCTGCCAATGGCAAAGAACGCCTACGCTGGACACACGAACTCCATGATCGCTTTGTGCACGCTGTAAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGGATGAAGGCCATGGGTGTTTCTGATCTCAGCATTTATCATGTCAAAAGTCACTTGCAGAAATACCGGATCTCCAAATTGATTCCAGAGTCTACCTCAAAAGGAAAGCCTGAGAAGAGAAGCATATCAAATACACTGCCAAATTTCAGTTCTACATGTGCTCTTCAGCTGAAGGAAATTCTTCAAATTCAGAGGGAGGTGCGAAACCGCTTGAGTGATCAAGCAGAGGTTCAGAGAAGGTTGAAGCAAAAAATTGAAGCACAAGAGAAATACCTTGATAGAATTGGACAAAGCCATGAAAGCAGAACAACAATCACTAGAAAATCTTCCAAGCCATCATCATTTTGTGCTACAAATAATAATAATAATAAACATCTCCCTTCTCTCTCTGAGGAATCAGAATCTATTATTGAGACACACCCTGAAGAAGTAGTAGAAGAAGAGGAAGAGCATCAATCATGTTCCAAAAGACAAAGGGTAGTAATAGATGAACATGTTTTTCCATCAAGCTTTGAACTTGAACTAGAATCATCCACCACCACAGAATTCATTGATCAATCATGGAATCTTTCATGGAGTCAACTTGCAGCTGCATGTGAATCACCTTTGATGCCAGGATTCTTATTATAA 768 0.4115 MGSTRSDGSANGKERLRWTHELHDRFVHAVNRLGGPDRATPKGILKGMKAMGVSDLSIYHVKSHLQKYRISKLIPESTSKGKPEKRSISNTLPNFSSTCALQLKEILQIQREVRNRLSDQAEVQRRLKQKIEAQEKYLDRIGQSHESRTTITRKSSKPSSFCATNNNNNKHLPSLSEESESIIETHPEEVVEEEEEHQSCSKRQRVVIDEHVFPSSFELELESSTTTEFIDQSWNLSWSQLAAACESPLMPGFLL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01844 255 Gene3D - 12 73 - -
Adu04g01844 255 Pfam MYB-CC type transfactor, LHEQLE motif 102 141 IPR025756 -
Adu04g01844 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 198 IPR044848 GO:0003700
Adu04g01844 255 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Adu04g01844 255 Coils Coil 114 134 - -
Adu04g01844 255 MobiDBLite consensus disorder prediction 144 180 - -
Adu04g01844 255 MobiDBLite consensus disorder prediction 153 180 - -
Adu04g01844 255 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Adu04g01844 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 73 IPR017930 -
Adu04g01844 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 198 - -
Adu04g01844 255 SUPERFAMILY Homeodomain-like 13 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01844 Adu-Chr4 92253804 92258145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01844 3 138 G2-like Transcription Factor Family AT4G28610 50.000 1.17e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu04g01844 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01844 - - aip:107639556 453.366