Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01821 atggttctaaaaatcggaccggaccggAGCGCCGGAACTCTAGCGAGGAACCCTAGCCCTCCAGCGCCGCCGCCGTTCCCAGATCGTCAGCGCCGCCGCCGTCCCCAGGTCGTCAGCACCGCCGTTCCCAGGTCGTCGAACCCTAACCCAGTAACTCGGCTGGTACTCTTCATCTTCGCTGGCTTCTCGGCCCGGAACCCAGaaccttgctttctagtctcccctttcAAGTTCACTGCAGAGCGGCAGAGGTTGTGCCAAAGCTCTTCCCATTCTTCCTTGAAAACCCTAGCTTTCATCGCGCCGCCGGTGGCCTCACCATCGCCGCCTGGTTCATCGTGGTTGTTCGCCATTCCTCGTGGTTCATCTTGCTCGAAGGCCCTCCCGTTCGACCAACGCCAACGTCTCCAGGTTCTGCTCTGCTGTCTTCCGTCCGTCGTGTTCATCGCCAGCTCGCCAGCATTCGTGGCCAGCTCCCCGTCGTTCGTCGCCAGCTCACCAGTGTTTGTCGCCAGCTTCCCGTCGTCCGTCGCTCTCCCGCAAATCTCTGGTCACTGCCCTCGCCGAAGATGGTTTTCATACATTTGGCATAACAAGCACTTGAACAAATGGGATCAAGCAGCTTTCTGTGGAATTTTACCAAAAATGGTTCCAGTTCGGGGTGGCTCTATGTCTCCCACACTTAATCCAAAAACCAGCTCTTCTGCAGGAAACTTCTCTGATGATTATGTCTTGGTTGAGAAGTTTTGCGTTGACAAATACAGATTTTCACATGGAGATGTTGTGGTCTTCAGCTCTCCATTGAATCACAAGGAGAGACACATAAAGAGAATAGTTGCATTATCTGGTGAATGGTTTGGTAGTCGTCAGAACTATGATGTGTTGAAGGTTCCAGAAGGACATTGTTGGGTTGAAGGAGATAATGCGGCTTTTAGCATGGATTCAAAGTCATTTGGACCTATTCCCTTGGGCCTCATACGAGGAAGGGTGACCCATGTTGTGTGGCCTCCACAAAGAATAGGCGCCATCCAGAGTCCTCCACGAGAAAGATTATCTTCTTTATAG 1065 0.5014 MVLKIGPDRSAGTLARNPSPPAPPPFPDRQRRRRPQVVSTAVPRSSNPNPVTRLVLFIFAGFSARNPEPCFLVSPFKFTAERQRLCQSSSHSSLKTLAFIAPPVASPSPPGSSWLFAIPRGSSCSKALPFDQRQRLQVLLCCLPSVVFIASSPAFVASSPSFVASSPVFVASFPSSVALPQISGHCPRRRWFSYIWHNKHLNKWDQAAFCGILPKMVPVRGGSMSPTLNPKTSSSAGNFSDDYVLVEKFCVDKYRFSHGDVVVFSSPLNHKERHIKRIVALSGEWFGSRQNYDVLKVPEGHCWVEGDNAAFSMDSKSFGPIPLGLIRGRVTHVVWPPQRIGAIQSPPRERLSSL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01821 354 Gene3D Umud Fragment, subunit A 212 346 - -
Adu04g01821 354 CDD S26_SPase_I 216 330 IPR019533 GO:0004252|GO:0006465
Adu04g01821 354 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 213 345 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Adu04g01821 354 PRINTS Bacterial leader peptidase 1 (S26A) family signature 274 286 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu04g01821 354 PRINTS Bacterial leader peptidase 1 (S26A) family signature 212 228 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu04g01821 354 PRINTS Bacterial leader peptidase 1 (S26A) family signature 297 316 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu04g01821 354 SUPERFAMILY LexA/Signal peptidase 215 343 IPR036286 -
Adu04g01821 354 MobiDBLite consensus disorder prediction 1 45 - -
Adu04g01821 354 Pfam Signal peptidase, peptidase S26 290 335 IPR019533 GO:0004252|GO:0006465
Adu04g01821 354 Pfam Signal peptidase, peptidase S26 215 284 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01821 Adu-Chr4 91185832 91191979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01821 224 347 MADS-box Gene Family AT1G29960 36.154 6.70e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01821 K09648 - gmx:100527429 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01821 04 91185832 91191979 Adu04g01821 04 91185832 91191979 ECH