Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01806 ATGGCGATCTCCTCCTGCGATGATCTCCTCCTGCCAGTGACGTCTCCTCTAGCGACGGTCTCCTCCGGCAACCGACTTCTCCTCCAGCGGCGATCTCCTCCTACTACGTTCTCCTGCGGCGGAAATCTCGTCCATCGAGCTATTGAGCTGCGAGTTTCTCCTCCGGCAGACTCACGAGTTTCAAAGTGGTTTATCAACGCAAGGGTTCATCCAGAGGAAGAAGAATGCTTGGGGCGAGTGATGGACACATTTGGATCGGTGGAGCTTGATTTCTCTTCATACACGCAGCAGCAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTAACTCTAGGGTTACAACAGCACGGTGGAAGCGGGGTGAGCCTGGCGTTCCCTCCTCCTCCGGTGAGCAGTCATCATAGCTCGCTCTTCTACGCAACAACCAGGGATCAGATAATGGACAGCTGTCCACCCTCATCGTCATCTATAGTTCATCACTACTCTCTTGTTGATGGCGAACCACAAAATCTTCCTTACAGGAATCTCATGGCAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTGACTCTAGGGTTACAACAACACGGTGGAAGCGGGTGAGCCTGGCATTCCCTCCTCCTTCGGTGAGCAGTCATCATAGCTCGCTCTTCTATGCAACAACCATTGATGCTGCTATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCCAAAGAGGCAAGGGCTAGAATCAGATATGTTCACTTTTTACCTTTCAATCCTGTTGACAAGAGAACTTCTCTGACTTACATTGATGCTGATGGAAACTGGTACTGTGCCAGCAAAGGCGCTCCGGAGCAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTCATGCCATTATTGATAAGTTCGCCGAAAAAGGCCTTCGTTCCCTAGCCATTTCAAGACAGGAAGTTCCTTCTTGGCAAGACAAAGATGCAAGTATCGCCACACTTCTCGTCGAAGAGTTAATTGAGAAAGCCGATGGATTTGCCGGAGTCTTTTCAGTTTTGATGGGTCATCTTTCTTCAATGTTCAATGGGTTGGCAAAATCACTGACAATTAAGAAAGGGAGGAATTCAGAAAGATGCAGCGGAAGAGAAGCGGCGGAGAAGGAAGCAAAAAAGAATGAGTTCTTATTATGTAGCTCAAGTAATATTTATTTACACGGACATGAACAATGA 1269 0.4791 MAISSCDDLLLPVTSPLATVSSGNRLLLQRRSPPTTFSCGGNLVHRAIELRVSPPADSRVSKWFINARVHPEEEECLGRVMDTFGSVELDFSSYTQQQQQQQQGFNGVSLTLGLQQHGGSGVSLAFPPPPVSSHHSSLFYATTRDQIMDSCPPSSSSIVHHYSLVDGEPQNLPYRNLMAAAATAGFQWGFFDSRVTTTRWKRVSLAFPPPSVSSHHSSLFYATTIDAAMPTIVGMAPKNQDAIDAAIVGMLADPKEARARIRYVHFLPFNPVDKRTSLTYIDADGNWYCASKGAPEQIMNLCNLRDDAKKKVHAIIDKFAEKGLRSLAISRQEVPSWQDKDASIATLLVEELIEKADGFAGVFSVLMGHLSSMFNGLAKSLTIKKGRNSERCSGREAAEKEAKKNEFLLCSSSNIYLHGHEQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01806 422 PANTHER PLASMA MEMBRANE ATPASE 238 335 - -
Adu04g01806 422 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 238 364 IPR023299 GO:0000166
Adu04g01806 422 PANTHER CALCIUM-TRANSPORTING ATPASE 238 335 - -
Adu04g01806 422 Gene3D - 221 349 IPR023299 GO:0000166
Adu04g01806 422 PANTHER CALCIUM-TRANSPORTING ATPASE 338 364 - -
Adu04g01806 422 PANTHER PLASMA MEMBRANE ATPASE 338 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01806 Adu-Chr4 90068581 90072162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01806 238 342 Primary Pumps ATPases AT2G24520 74.286 4.62e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01806 K01535 - ahf:112801147 356.295