Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01800 ATGAATTTGGCCATAAGGCATATAACCATGATTAAAAATTGCTTTGGTGCTTTGAATTGGTGTAGAGGGAGAGATGATAGTGATACTGCTGAGAAGCCACAGGAACAAGTCATTGCAACCAAACAATTTACCTATAACTCGTTGCGATCGGCAACCAGAGATTTTCACCCTTCAAGCAAACTTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGAGATGGTACTCCAGTCGCTATCAAGTCTCTTTCTGTTGAGTCTAAACAAGGAACCCGTGAATTTATGACTGAAATTGATATGATATCGAATATACGGCATCCAAATCTTGTCGGACTAGTTGGCTGCTGTGTCGAGGGTAGTCATCGAATATTGGTGTATGAATTTCTGGAGAACAATAGCCTTGCAAGTTCTTTGCTTGGTTCTAAAAGTAAATATGTTGCTCTGGATTGGCCGAAGAGGGCTGCTATTTGCCGCggtacagcttctggtttggtgttcctccatgatgaggctcagccaaacattgttcacagagatatcaaggccagcaacatccttctggacgagaacttcagcccgaaaattggagattttggtcttgcgaaactttTTCCTGATAATGTCACCCATGTTAGCACTCGAGTTGCAGGAACGGTGGGATACCTGGCACCGGAATATGCACTTCTAGGACAGCTTACAAAGAAAGCAGATGTATATAGTTTTGGGGTTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGCAGCAAAGCTGCATTTGGAGACAATCTCCTGGTTCTGGTGGAGTGGGCTTGGAAGCTCAAGGAGGAAAATAGGCTTCTGGACATGGTCGATCCGGAACTAGCCGAATTCGATGAGATGGAGGTTTTCCGGTTCATTAAGGTTGCTCTATTTTGCACTCAGGCTGCCGCTCAGAATCGGCCTAACATGAAGCAAGTGATGGAAATGCTCTCAAAGGAAGTTCATATTAACGAGAAGGCGTTGACTGAGCCTGGAATATACAGATGGCATAGCTCTGGTAAGATGGGTGGTTCTTTGAATGAGACACCATCTTCTCAACTATTCAAGAACAAAAAAACCGGAATGCCGCATGAAAACTCAACCAACTTTAGCAGTAACGACGTCGTGACAGAGATGCTCCCCAGATAA 1173 0.387 MNLAIRHITMIKNCFGALNWCRGRDDSDTAEKPQEQVIATKQFTYNSLRSATRDFHPSSKLGGGGYGVVHKGVLRDGTPVAIKSLSVESKQGTREFMTEIDMISNIRHPNLVGLVGCCVEGSHRILVYEFLENNSLASSLLGSKSKYVALDWPKRAAICRGTASGLVFLHDEAQPNIVHRDIKASNILLDENFSPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGDNLLVLVEWAWKLKEENRLLDMVDPELAEFDEMEVFRFIKVALFCTQAAAQNRPNMKQVMEMLSKEVHINEKALTEPGIYRWHSSGKMGGSLNETPSSQLFKNKKTGMPHENSTNFSSNDVVTEMLPR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01800 390 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Adu04g01800 390 CDD STKc_IRAK 61 327 - -
Adu04g01800 390 SMART serkin_6 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01800 390 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 382 - -
Adu04g01800 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 382 - -
Adu04g01800 390 MobiDBLite consensus disorder prediction 367 390 - -
Adu04g01800 390 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
Adu04g01800 390 Pfam Protein tyrosine and serine/threonine kinase 58 325 IPR001245 GO:0004672|GO:0006468
Adu04g01800 390 ProSiteProfiles Protein kinase domain profile. 55 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01800 390 Gene3D Transferase(Phosphotransferase) domain 1 131 339 - -
Adu04g01800 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Adu04g01800 390 MobiDBLite consensus disorder prediction 367 384 - -
Adu04g01800 390 Gene3D Phosphorylase Kinase; domain 1 21 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01800 Adu-Chr4 89372241 89376328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01800 43 340 Receptor kinase-like Gene Family AT1G56120 53.691 7.38e-106 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu04g01800 PK_Tyr_Ser-Thr 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01800 - - gmx:100816683 611.298