Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01743 ATGCGGTGCAGGACATGCTGCAAGAGCTGTGGCTTCGATTGCCAAACCCATGTGAAGAGCACTTGGGTTCCCGCTTTCAAGCGCCGCGAGAGGCAGCAACAACTCACCTCTATCCAACAACAGCTTTTTGCTGTTAATGTTCCCAAGCGCCAAAAAGATCATGCCTGGTGGCTGGCAGCAGCAGAGGAGGAAGACGaaggatga 204 0.5196 MRCRTCCKSCGFDCQTHVKSTWVPAFKRRERQQQLTSIQQQLFAVNVPKRQKDHAWWLAAAEEEDEG 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01743 67 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 54 IPR007818 GO:0003700|GO:0006355
Adu04g01743 67 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 54 - -
Adu04g01743 67 Pfam Domain of unknown function (DUF702) 1 49 - -
Adu04g01743 67 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 1 28 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01743 Adu-Chr4 83772950 83773153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01743 1 53 C2H2 Transcription Factor Family AT5G66350 72.222 6.03e-22 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu04g01743 DUF702 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01743 - - adu:107462205 85.5001