Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01733 ATGCTGATTCGCACCCTTCAAAGGAAGTACATGTTCCTCCTCTGCAATGCCATTCTTGATTTTCTTGCCAGAAAATCACTCTATGATGTACCACTAGTGCGAGGAGAATGTTATTATGAACAAGTATCATCATTAGAATTGTTATTAGCTAATCAAGATTATGAACCTTTGTTAGCAGAAATTGAGGAAGGACAAGAACATAAAGAAGGAAGAGGAGGGAAAGGAATTAATAGCGAAGAAGAAGTGGTTGAAGTTGAACTTGAGGATGCAACAAAGGAAGAAGAATTGGCAAATGCAGATGAACTGAACAGAAAGTTTGAAAAGTTCATAAGGAAAATGAAGGAGGAGATCAGGATTGAAGCTCAAACACCATGTAAAGCCGTGGTAGTGGGAATTGTAACCGATGATATCAGAATGTATGAAGTTCTTGCATTGAAAGTTACTGCACCCAGGTTTATAGAGACTGCACATGCTAGAATAGAGATGGCTGGTGATGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCACCTCTCGGACAGAACACGGTTCTTTTTAGAGGCCCAAAGAACTCCAGGAAAGCTGTAAAATACTTTGGTCCTGCTCTTGGTGTTCCTCACAGCCATACCAAGCCTTATGTTGAGAAGCTTGTTGAGAAATCAGAGTtttga 672 0.4003 MLIRTLQRKYMFLLCNAILDFLARKSLYDVPLVRGECYYEQVSSLELLLANQDYEPLLAEIEEGQEHKEGRGGKGINSEEEVVEVELEDATKEEELANADELNRKFEKFIRKMKEEIRIEAQTPCKAVVVGIVTDDIRMYEVLALKVTAPRFIETAHARIEMAGDECLTFDQLALRAPLGQNTVLFRGPKNSRKAVKYFGPALGVPHSHTKPYVEKLVEKSEF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01733 223 Gene3D - 98 223 - -
Adu04g01733 223 Coils Coil 92 112 - -
Adu04g01733 223 Pfam Ribosomal protein 60S L18 and 50S L18e 109 221 IPR021131 -
Adu04g01733 223 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 126 216 - -
Adu04g01733 223 PANTHER 60S RIBOSOMAL PROTEIN L18 126 216 IPR000039 GO:0003735|GO:0005840|GO:0006412
Adu04g01733 223 SUPERFAMILY Ribosomal proteins L15p and L18e 98 187 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01733 Adu-Chr4 83212775 83215014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01733 127 214 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 77.273 3.02e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01733 K02883 - aip:107613270 207.223