LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g01703	ATGGTGAAGAGAATAGAGCTGAGTAGACATTCGCGACGTCGAGCAGCAGAAATGTTCAGCGACAACAACAACATCCTCGGGTTAGACAAGGAGGACAGAGACGACGAGTTCAAGACGGCTGACAATGATGAGGACAGGTCTGGGCTTGACGACCTTTTGGCGACGACGATGATGACAAGTCTAGGCTCGATGGCACCCTTAGGGTTGATGACCCTTGCACCGCCGTCTCACCGAACCTCCATTGGACTCAACTTCCATCGGCCTTACTCGCATCGCTCCCTTCCGTCGCACCCCTTCCGTCGGCCTTGCTCGCATCACTCCCGTTCGAACCCTAATGTGCGTTTCTCTTCGATCTCGCCACTAGTGCTTGCTCTTCTCCGTGTGTTACTGCGTTTCTCTTTCGATCTTGCCTCAGCTGTGCAGGGATTAGATGCTATAGATGCCGTAATTGTTGGTATGCTTGCTGATCCAAAGGAGGCAAGAGCTGGAATTAGGGAGCACAGATCCAGCAAAGGTGCTCCTGAGCAGATATTGAACTTCTGCAACTGCAAAGAGGATGTGAGGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGAGCGTGGGCTCCGATCTTTGGGGGTTGTTAGATAGCTGCTGCGACATGGCGAGGTTGGTTTGGGCTTTGTGCTTTGTGCTACAGAGGAGAAAGCTAATGAGTGTTTTAGTGCTGCAAAGTATATCATGGAGATTTCGGAATCAAAGTTGGCAAAGCAATTACATTGAAGAGGGAAGTGTTGTCCCTGCTGAAATAAGATATATGGTTTTGGATGATCTAGATTTCATGCTTGGTAGTGGCCTTGGTTCTAACATCCACAAGATTCTCGAACCATTACAAGATCATGAATCAACATCTTCTTACAAAAGATTTCAAACCGTTCTAGTTACATCGTCGATCACCGAGGTTTTGGGTGATGAATCCCCCATTGTGAAGCATCTTGAGCGTGATCATGCTGAAAATATTTATATGGCAGGGAAAGATGTAGAAGCAATTGTACAAAAAAGATTGCCCAAGTTCAAGAAAAAGAAGTAA	1071	0.4678	MVKRIELSRHSRRRAAEMFSDNNNILGLDKEDRDDEFKTADNDEDRSGLDDLLATTMMTSLGSMAPLGLMTLAPPSHRTSIGLNFHRPYSHRSLPSHPFRRPCSHHSRSNPNVRFSSISPLVLALLRVLLRFSFDLASAVQGLDAIDAVIVGMLADPKEARAGIREHRSSKGAPEQILNFCNCKEDVRRKAMQLLLSLLSVGSDLWGLLDSCCDMARLVWALCFVLQRRKLMSVLVLQSISWRFRNQSWQSNYIEEGSVVPAEIRYMVLDDLDFMLGSGLGSNIHKILEPLQDHESTSSYKRFQTVLVTSSITEVLGDESPIVKHLERDHAENIYMAGKDVEAIVQKRLPKFKKKK	356

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g01703	356	PANTHER	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	252	342	-	-
	Adu04g01703	356	PANTHER	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE	252	342	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g01703	Adu-Chr4	79696535	79700838	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu04g01703	137	190	Primary Pumps ATPases	AT2G24520	57.692	4.65e-19	86.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g01703	-		-	adu:107484769	167.548