Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01686 ATGTTTATAGAATGGATGCAGAGTGAAAGAGGTAATAGGCTTGCTGCGATCAGCACATCCTTTGGTCATATTAAAGCGCATAAGGTGTGGAAGCTCAAAGTACGTGTCATTAAACTTTGGACCATTTTTTACTTTGCAAAATCTGGGATGAAGGCACCTATTGAGATGGTTGTCCTTGATGAAGAGGGGGATACAATTCAATGCACTGTTAAAGACATATTTGTTCCTATCTTCGAGGGCCTACACGCTGAAGGCAACGTGTATGTGGTCAGTAATTTTGGAGTTGCTTTAAATACCATGAAATTCAAGCCTACTAGACACAAATTTAGAATCCACTTCAAGATGGATACGATTGTGCGTCCGgacccaactctcttgaaggagaaggttaatcttatcaccttgaatcttgggtgtgATGTGATAGGTCAGCTTACCTCTAAGGGTAACTTGGTCGAGTTCACACGGGACGGGAAGCGGTCAAGTTATATCACGATAGAACTTGATGATCTTGAGGGTGGACAGAAATTAAGGGTAACGTTGTGGCAGTCTTTTTCTTTTGATTTGCTCAAATATCTGGAGGAACACCCATGTCTTACCTATGTGGTTATTCTCCAAATGGGCAAGATAAAATTTTATAGTGGGGTCATGGGTGTTTCCAACACAAACTACAATTCGAAACTGTTTATCAATGTTGAGTTTCCAACTGCCAGGGATTTCTTTGCAAGGGTAAACAAATTGGACCCTGTTGACAAACAAGTCATAATGCCGCTGGATGCTGTATTTGTTACTATCGGAACGATTAAGGAAGTTGAGGCCGAGTTTGGTTGGTGGTACAAAGGATGTAAGAAGTGTCATCGTGGCTTAGGGGAATTTGAGAAAAGATATTTCTATCCCAATTGCATTAAAGACTATGGGTTCTACGTGCCAAGATACAACATCCACATAAGGGTGATAGACCACACCGATGCTACCTCTTTTGTTTTGTTCGATGGAGAACCTGCAAAGTTTCTTGGAGTTTCTACCAATGACCTTAGGCAGTCTTGTGGTGTTGAGAAAAACTCTTGTCCCGAAGGGATTAATAAGCTTAGGGATATTAAGTTCATCTTCAAAGTACAACTGAAGATGAGGAATCTAAACTCTTATGAGCCATATGTGATTCATGTGCTGAGAATGACTAATGAGAATTCTTTGGTCCCTGCTTTCCTGGATAAATACAATCCAGACCCTGGCCTTTTGTTGCATGAAAATTCTGAACTATTGAGTTTGTCTACTGGTTCATATGACACTTATAAGGCTTGTGAGAGTGAGTCAACTCCATCACCGTCAATTGATGAGAAACATAATTCTAAGATTCTTGGAACTAAGAAACATATGGAAGAGGTTGGAGAGGAGTCAGTTTCATCCAAATCTAAGAAAGGGAAGTGGGTTGTGATGGAGGACTAA 1446 0.3893 MFIEWMQSERGNRLAAISTSFGHIKAHKVWKLKVRVIKLWTIFYFAKSGMKAPIEMVVLDEEGDTIQCTVKDIFVPIFEGLHAEGNVYVVSNFGVALNTMKFKPTRHKFRIHFKMDTIVRPDPTLLKEKVNLITLNLGCDVIGQLTSKGNLVEFTRDGKRSSYITIELDDLEGGQKLRVTLWQSFSFDLLKYLEEHPCLTYVVILQMGKIKFYSGVMGVSNTNYNSKLFINVEFPTARDFFARVNKLDPVDKQVIMPLDAVFVTIGTIKEVEAEFGWWYKGCKKCHRGLGEFEKRYFYPNCIKDYGFYVPRYNIHIRVIDHTDATSFVLFDGEPAKFLGVSTNDLRQSCGVEKNSCPEGINKLRDIKFIFKVQLKMRNLNSYEPYVIHVLRMTNENSLVPAFLDKYNPDPGLLLHENSELLSLSTGSYDTYKACESESTPSPSIDEKHNSKILGTKKHMEEVGEESVSSKSKKGKWVVMED 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01686 481 MobiDBLite consensus disorder prediction 441 481 - -
Adu04g01686 481 SUPERFAMILY Nucleic acid-binding proteins 260 393 IPR012340 -
Adu04g01686 481 Pfam Replication factor-A C terminal domain 262 382 IPR013955 -
Adu04g01686 481 CDD RPA1_DBD_A_like 31 119 - -
Adu04g01686 481 Gene3D - 123 249 IPR012340 -
Adu04g01686 481 Gene3D - 251 400 IPR012340 -
Adu04g01686 481 Pfam Domain of unknown function DUF223 55 127 IPR003871 -
Adu04g01686 481 PANTHER REPLICATION FACTOR A 1, RFA1 257 407 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu04g01686 481 PANTHER REPLICATION FACTOR A 1, RFA1 38 231 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu04g01686 481 SUPERFAMILY Nucleic acid-binding proteins 136 243 IPR012340 -
Adu04g01686 481 MobiDBLite consensus disorder prediction 434 481 - -
Adu04g01686 481 CDD RPA1_DBD_B_like 140 240 - -
Adu04g01686 481 Gene3D - 23 122 IPR012340 -
Adu04g01686 481 PANTHER BNAC07G49340D PROTEIN 257 407 - -
Adu04g01686 481 PANTHER BNAC07G49340D PROTEIN 38 231 - -
Adu04g01686 481 CDD RPA1_DBD_C 259 380 IPR013955 -
Adu04g01686 481 SUPERFAMILY Nucleic acid-binding proteins 28 124 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01686 Adu-Chr4 78214250 78223295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01686 30 237 Core DNA Replication Machinery Family AT2G06510 26.957 3.96e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01686 - - adu:107477146 741.11