Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01684 ATGGATCCTAGACCAGTAACGCGATGCGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCGAGGAACAGGAGATGGTATGTTGACTTCTTCTCCGATGAACATAACCATGACATGTTGGAGGCAAGGTTTAGGGGAATGATATGGTCTTACCGGGCAATAAAAACGAGGCATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCAACAATATTTCGGGCATTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTCAAGTGAAAGACATCTATAATGCAATTGAGAAGCAAAGAAGAGCTGGAGCAAGCGACACGGATAATGCACTCAAGTATTTACAAATGTTGAAGAGGCGTGACCCCTGTATGTTTTGGAAGTATTCGTTGGATGAACAACGGAGGCTCCACAATATATTTTGGTGTGATGGTGCAAGTCAGTATGATTTCAATATTTTCAGAGATGTTATGGGGTTTGATGCAACGTACGGGAGGAATAAGTACAAATGTCCCCTTGTGATATTCTCTGGCGTGGATCACCACATGCGCATTGTTGTGTTTGGATGCGCGGTTCTCTCAAAGGAAGGGGAGGAAAGATGTGTGTGGTTGCTTCGGGCATTTCTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCTGTTATTACCGACGATGATCAAGCCATGAAGAGTGCAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACATAATGCGACCGCTCGATTGAAGAATTTGGGTTGCAAAAAAAAATCATGGGTCAAGGATATGTATGAAAGGAAACATATGTCGTCAAATGCCCACATTAGGGGTAAGTTCTTTGCTGGGCTCAAGACAACATCAAGGAGAGTAGTGGTTGCTGATTACAAATTTGCTTATGGAGAGCCGGTTGTGAAAACAAGATTGGAGGAGTTAGAGCGGTTTGCAGCAGCAGTATACACACGAGAGGTCTTTGTCTTATTTCGGGAGGTGCTATTACTAGCTAGCAATGTCAGAATAGTTTCTTCGAAGAAGACAAGCACGTGTACATTGTTTGAGGTGGCCATGTATTGCCAAGgtagtcttatactgggtcgttggacaaagaaggcaaaACAACCACCGATAAATAACCATGTTTTTAGTGGAGAGATTCCTGATGCAGCCTATATGAGTATGCATGCGGCAATGCTCGATGACTGTAGAGAACTGGTAAAGCTTTCTTGTAGTAACTTTGAGGATTACTTCGAGGTGAAGACCAAAATAGCTAATGAACGAGACGCGTTAAGAGAAAAGATCCGAAAAAGGTTGGCGACCACTGCTGAAGGCGGGGGCGATGATGCGTCCATACACGATCCTCCAAGAGCCAGACATAAAGGGTGTGGTCGTCATGTTGTGACGACTCGTGGGAGGTACTGGCGTGTCCAACGTTGTAGAAAGTGTGGCAAGGCTGGCCATAACACTCGTAGATGCGCAACCGGGAATGGTGAGGACACCACGCATGAATTAGATGCTTTTGGATCATCGCATAACATGGACGAATCACAAGAAGCCGAGGCTTCACAACAGATGGAGTATGATGATCTGAGCTTCTAA 1623 0.4387 MDPRPVTRCGCNARIKVHVDSRNRRWYVDFFSDEHNHDMLEARFRGMIWSYRAIKTRHLHQINTMRSSGLRVPTIFRAFANQSGGFEMVGFQVKDIYNAIEKQRRAGASDTDNALKYLQMLKRRDPCMFWKYSLDEQRRLHNIFWCDGASQYDFNIFRDVMGFDATYGRNKYKCPLVIFSGVDHHMRIVVFGCAVLSKEGEERCVWLLRAFLEAMKGKAPKSVITDDDQAMKSAIKAVFPEAHHRLCSWHLLHNATARLKNLGCKKKSWVKDMYERKHMSSNAHIRGKFFAGLKTTSRRVVVADYKFAYGEPVVKTRLEELERFAAAVYTREVFVLFREVLLLASNVRIVSSKKTSTCTLFEVAMYCQGSLILGRWTKKAKQPPINNHVFSGEIPDAAYMSMHAAMLDDCRELVKLSCSNFEDYFEVKTKIANERDALREKIRKRLATTAEGGGDDASIHDPPRARHKGCGRHVVTTRGRYWRVQRCRKCGKAGHNTRRCATGNGEDTTHELDAFGSSHNMDESQEAEASQQMEYDDLSF 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01684 540 Pfam MULE transposase domain 160 254 IPR018289 -
Adu04g01684 540 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Adu04g01684 540 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 261 IPR031052 GO:0006355
Adu04g01684 540 MobiDBLite consensus disorder prediction 518 540 - -
Adu04g01684 540 ProSiteProfiles WRKY domain profile. 1 40 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g01684 540 MobiDBLite consensus disorder prediction 511 540 - -
Adu04g01684 540 ProSiteProfiles Zinc finger CCHC-type profile. 486 500 IPR001878 GO:0003676|GO:0008270
Adu04g01684 540 PANTHER OS02G0262500 PROTEIN 2 261 - -
Adu04g01684 540 MobiDBLite consensus disorder prediction 449 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01684 Adu-Chr4 77918856 77920806 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g01684 MULE 1.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01684 - - adu:107488338 960.674