Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01682 ATGACGATCATAGAGCACTTTCTTCTATTCCTCATCACTACAATCCTTATTACACTATGCGTAAATGCTCTAAAAGATTGTGAAGATTGTGGCCACATCAAAGTGCCATACCCACTAAGCACTTCTCCAAATTGTGGGGACCCAAATTACAAGATTAGATGCAATTCCGGCATGCTTTGGTTCGACACAATCAATGGTTCCTCATACATTATCACCTCGATCAATCCCACGTTGCAGCGTCTTGTGATTCAGCCACCGGGTTTGGCCAACAACACGTGCATGTCACGTGATTTCAAGAACGAAGGGATGTGGCTTGACACAAACTCACCCTTCAACATTACTTCAAGTAACACTTTGATCCTCATGAACTGCTCCCTTGAGATCTTGACCATGCTGTTTAACTGTTCCTCGACCAGCATTTGCCATAAGTACATTGAGGAGGGCAATGCGGTAATTTCTAAGAATTGTGGCGTGACGAGCCACGCCTCGAAATTATGTTGTGATGTAAAGACCGGTGGGTCTGCTACTTCACATAGGATTAGGGTTAGGGAAGATCGTTGTGCTGCATATGCTAGCTTTCCCAATTTGGATCCCTCTTTGCCTGTGAGTATGTGGCGGCCGGGGGTGGAGATAGAGTGGCAGCTGCCGGCCGAGCCGTCGTGCAAGGTAGCGGGGAATTGCTTGGATGTGGCAAACTCTCGTTGTTTGCCGGATCCCGTGGCAGGTGGAGAAGGTAAGTGCTTGTGCAATGCTGGCTTTCAATGGGATCCGGTGAATGGAAAATGCCAAGATACCAAGTGTCAGCATGGAAGAGGATGCAAGCTTCGTAAGAAATCCCCGCTTATTGGAGGGTTGATATTGGCTGGGACTATCATGGTAGCAGGAGCTTTGTTCACTGTAATGGGCTATTACTTTCAGAGGAAAAGGATCAAAAGAGAGATCCAAAAAAGAATAACAAGCAAGGCACACTTCGTACTCAACTCAGACAACAATGGTAGATCTGCAAAAGTTTTCACCATAAAGGAAATCACAAAAGCAACCAACAACTTCTCGAAATCCAACCTCCTCGGCGCCGGCGGCTTCGGCGAGGTATTCAAAGGTGTTCTGAACGACGGAACCGTCACAGCCATCAAGAGAGCAAAGCATGGCAACATAAGAGGCATTGATCAAATCCTCAATGAGGTTAAGATCCTTTGCCAGGTCAACCATAGAAGCTTAGTGAGGCTTTTGGGTTGTTGTGTTGAGCTTCCAAATGAGCCTCTTCTTATATATGAGTATGTCTCCAATGGCACCCTCTTTGACCACCTTCACAACAGGAACTCCAGCAAATGGATCCGTCTTGGGTGGCATTCAAGGCTAAGAATCGCACACCAAACAgctgaaggacttgcgtatcttcacgatgcagccatacccaaaatctaccatagagatatcaagtcaagcaacattctcttggacgaaaaactcgacgcaaaggtctcagatttcgggctttcgaggttagcggccagcgaagcgacccacgtgacaacctgcgctcaagggacactgggctaccttgacccagactactacgtgaactttcagctcacagagaaaagtgatgtgtatagcttcggtgttgttctgttagagCTACTGTGTTCTAAGAAGGCTATTGATTTCAATAGAGAAGAGGGGGATGTGAATTTGGTTGTTATGGTGAAGAAGGCCTTGAAGGAAGGGATGTTAATGGATAAAGTGGTTGATCCAATGCTGAAAATTGGAGCTAGTAAGTTGGAGTTGGAGAGTATGAGGGCTTTTGGGTCTCTTGCTGTTGGGTGCTTGGATGATAGAAGGGACAATAGGCCCTCAATGAAAGATGTTGCTAACGAGATTGAGTGCATTATTGGTATTTTTGCTGATGCTAAGGCTATGGGGTCTAAAGCTTGGAGCTCTCTCATCTCATATCTCTCGTTGGGTCTCTTGCACTCAAGCTCTCTGGTCTACGGTCTCTCTTACTATCTCGATCTCGCACTTGGTCGTCATTGTCGCTTTTTGTGTTGTCACCATCTCGCATCTAGTCGCGCTCCTTCCCCGCGATCGTCATCGTTAGCAGCAAAAGTAGCTGGTCACAGCTCTAGTCATTGTTGTCGCTTTCTATCACGTCACCATCTCGCATTCAATGCGCACCTTCCCTGTGTTCGTCATCGCCGACAGCAGAAGCAGCAGGTCCTAGTGCTAGTCGCCGTTGTCATCTTCTTGCTTCGAGACTCGTTGTCAGCTTAA 2271 0.413 MTIIEHFLLFLITTILITLCVNALKDCEDCGHIKVPYPLSTSPNCGDPNYKIRCNSGMLWFDTINGSSYIITSINPTLQRLVIQPPGLANNTCMSRDFKNEGMWLDTNSPFNITSSNTLILMNCSLEILTMLFNCSSTSICHKYIEEGNAVISKNCGVTSHASKLCCDVKTGGSATSHRIRVREDRCAAYASFPNLDPSLPVSMWRPGVEIEWQLPAEPSCKVAGNCLDVANSRCLPDPVAGGEGKCLCNAGFQWDPVNGKCQDTKCQHGRGCKLRKKSPLIGGLILAGTIMVAGALFTVMGYYFQRKRIKREIQKRITSKAHFVLNSDNNGRSAKVFTIKEITKATNNFSKSNLLGAGGFGEVFKGVLNDGTVTAIKRAKHGNIRGIDQILNEVKILCQVNHRSLVRLLGCCVELPNEPLLIYEYVSNGTLFDHLHNRNSSKWIRLGWHSRLRIAHQTAEGLAYLHDAAIPKIYHRDIKSSNILLDEKLDAKVSDFGLSRLAASEATHVTTCAQGTLGYLDPDYYVNFQLTEKSDVYSFGVVLLELLCSKKAIDFNREEGDVNLVVMVKKALKEGMLMDKVVDPMLKIGASKLELESMRAFGSLAVGCLDDRRDNRPSMKDVANEIECIIGIFADAKAMGSKAWSSLISYLSLGLLHSSSLVYGLSYYLDLALGRHCRFLCCHHLASSRAPSPRSSSLAAKVAGHSSSHCCRFLSRHHLAFNAHLPCVRHRRQQKQQVLVLVAVVIFLLRDSLSA 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01682 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 633 IPR045274 GO:0007166
Adu04g01682 756 Gene3D Phosphorylase Kinase; domain 1 324 426 - -
Adu04g01682 756 Pfam Wall-associated receptor kinase galacturonan-binding 27 83 IPR025287 GO:0030247
Adu04g01682 756 SUPERFAMILY Protein kinase-like (PK-like) 334 630 IPR011009 -
Adu04g01682 756 SMART serkin_6 350 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01682 756 ProSiteProfiles Protein kinase domain profile. 350 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01682 756 Gene3D Transferase(Phosphotransferase) domain 1 427 638 - -
Adu04g01682 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Adu04g01682 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 27 633 - -
Adu04g01682 756 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Adu04g01682 756 Pfam Protein kinase domain 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01682 756 CDD STKc_IRAK 356 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01682 Adu-Chr4 77770959 77786972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01682 27 635 Receptor kinase-like Gene Family AT5G02070 53.301 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu04g01682 Pkinase 2.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01682 - - aip:107636586 1272.3