Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01681 ATGATCAAATCCATCAACCCGACAACCCGCCATATCATAATCCAACCTGCCACACTTGATAGAAGCGCGTGTGTATCGACGGACTTGCATTTTGAAGGCATTCGCCTCAATGAAACCCTTCCTTTTGCCGTTGCCACCGGCAACACTATCATTTTGTTGAATTGTACCATCAACGCGCCTCACGCGCCGCCACTCGACTGCTCCGCAAGTAGCCCGTGCCACAGTTACATTAAGGACCATAAAGATGCCTACGCGTGCGGGCGTGTGGCAACTTGTTGTGCCTACAAAACCGGTGGGCCCCACAAGGAGTACGAGGTTCGGGTTCGCGGTAGTGGTGGTTGTGCGGCGTATCAGAGTTTTGTGGACTTTAACGGTGTGTCGGGGACACCAGGGAATGGGTGGCCAGATTTAGGGGTTGCAATTCAGTGGGTGGCACCACAGGAACCGGTTTGCAAGGGGCCAATGGATTGCAATGCATTGTTGAATTCCAAGTGTGGAGTGGGTCCCACAAGTGGTGGGGTGCAAAGGTGCTTGTGCATTGCTGGCTTCAAGTGGGATCCTGCTAATGGGTTATGTCAAGGTCTAGGAGGTCAAGCTCAAACTCAAGTTCAGAGTCAAATTTCAACTGTGGCTGCTTCCTTAGGTGGAATAATCACCATTGCAGTAGTAATTGGAGCCCTTTTATACAAGAAGCAAATTGAAATGAAGAAAAAAGCAAAGAAAACCTTGAACAAAAAGAAGAAAGAAATACTCACAAGTGCCAAAGCAACTCCATTGTCATCAAGGATCTTCACGGGCAGAGAGATCAGGAAAGCAACCAACAACTTCGCCGAAGAAAACCTCATCGGCTCTGGTGGCTTCGGCGAAGTGTTCAAAGGCACCTTTGATGACGGATCCATAACTGCCATCAAGCGTGCCAAGCTTGGAAGCACAAAAGGCATTGATCAAATCCAAAATGAAGTTAGGGTACTCTGCCAAGTTAACCACAGAAGCCTAGTGAGACTCCTTGGTTGTTGCTTGGAGCTAAAGCACCCTTTACTAATTTATGAGTATGTTTCTAATGGGACACTCTTTGATTACCTCCATCGTCTCCCTTTGGTCGGAGTAGGCGAAAGGCAACCACTTAAATGGCACACAAGACTAAAAATCGCACACCAAACAGCGGAAGGACTTTCATATCTTCACTCTGCCGCCGTGCCCCCAATCTACCACCGAgatgtaaaatctagcaatattcttcttgatgacaagtttgatgccaaggtttctgatttcggcttgtctaggcttgttgaattagctgaagaaaacaagagtcatatctttacgagtgcgcaggggactcttggataccttgatccggaatactaccgaaactttcaactgaccgataagagtgatgtttatagctttggagttgtgttAATGGAGCTACTCACTGCTCAGAGGGCTATTGACTTTAACAGGGAGGAAGAGAATGTGAACTTGGCAATGTATGCTAAGAAGAAAATAGTTGAGGACAGGCTTATGGAGGTTCTTGATCCGTTGCTTAAAGATGGATCTAGCAATGTGGAACTCGAAACTATGAAATCTTTGAGTTATCTTGCAGCTTCATGCTTGGATGATCAGAGGCAAAAAAGGCCTTCTATGAAAGAGGTTTCTGATGAGATTGAATACCTTATTAATGTTGTTAAGGGTCAAGGTTTCAAATCCAAACTATAG 1722 0.41 MIKSINPTTRHIIIQPATLDRSACVSTDLHFEGIRLNETLPFAVATGNTIILLNCTINAPHAPPLDCSASSPCHSYIKDHKDAYACGRVATCCAYKTGGPHKEYEVRVRGSGGCAAYQSFVDFNGVSGTPGNGWPDLGVAIQWVAPQEPVCKGPMDCNALLNSKCGVGPTSGGVQRCLCIAGFKWDPANGLCQGLGGQAQTQVQSQISTVAASLGGIITIAVVIGALLYKKQIEMKKKAKKTLNKKKKEILTSAKATPLSSRIFTGREIRKATNNFAEENLIGSGGFGEVFKGTFDDGSITAIKRAKLGSTKGIDQIQNEVRVLCQVNHRSLVRLLGCCLELKHPLLIYEYVSNGTLFDYLHRLPLVGVGERQPLKWHTRLKIAHQTAEGLSYLHSAAVPPIYHRDVKSSNILLDDKFDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQRAIDFNREEENVNLAMYAKKKIVEDRLMEVLDPLLKDGSSNVELETMKSLSYLAASCLDDQRQKRPSMKEVSDEIEYLINVVKGQGFKSKL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01681 573 Gene3D Transferase(Phosphotransferase) domain 1 352 567 - -
Adu04g01681 573 CDD STKc_IRAK 282 558 - -
Adu04g01681 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Adu04g01681 573 SMART serkin_6 276 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01681 573 Pfam Protein kinase domain 277 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01681 573 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 1 566 - -
Adu04g01681 573 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 566 IPR045274 GO:0007166
Adu04g01681 573 Gene3D Phosphorylase Kinase; domain 1 233 351 - -
Adu04g01681 573 SUPERFAMILY Protein kinase-like (PK-like) 257 555 IPR011009 -
Adu04g01681 573 ProSiteProfiles Protein kinase domain profile. 276 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01681 573 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
Adu04g01681 573 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01681 Adu-Chr4 77749597 77755121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01681 1 564 Receptor kinase-like Gene Family AT5G02070 55.304 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu04g01681 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01681 - - ahf:112794981 1072.38