Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01607 ATGTTCATGACTGGTTTCTCTGGTGATCTGGAAGCTTCTCATGGCAAGGCCACACAATTAGCAGGAAAAGCTATAACCAATGTAAGAAATGTTGCAACCTTTAATTCAGAAACCAAAATTGTTGGGCTTTTCGCTTTGAGCCTCGAAATTCCACTACAACGGTGCTTTTGGAAAGGACAAATTTCTAGAAGCGGACATGGGATAGCACAGTTTGCTTTTTATGCATCCTATGCACTTGGTCTCTGGTAA 249 0.4137 MFMTGFSGDLEASHGKATQLAGKAITNVRNVATFNSETKIVGLFALSLEIPLQRCFWKGQISRSGHGIAQFAFYASYALGLW 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01607 82 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 82 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g01607 82 Gene3D ABC transporter type 1, transmembrane domain 1 82 IPR036640 GO:0005524|GO:0016021
Adu04g01607 82 SUPERFAMILY ABC transporter transmembrane region 4 82 IPR036640 GO:0005524|GO:0016021
Adu04g01607 82 Pfam ABC transporter transmembrane region 3 82 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g01607 82 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 82 IPR039421 -
Adu04g01607 82 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01607 Adu-Chr4 72077744 72077992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01607 1 82 Calmodulin-binding Proteins AT2G36910 74.390 1.24e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01607 K05658 - gmx:100817829 141.739