Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01606 ATGGTCCTCATGGTCTCTGCTAATGGAGTTGCCAAAACTTTGACATTGGCTCCTGATTTCACCATGGGAGGCCGAGCTTTGAGGTCAGTCTTTGATCTCCTTGACCAGAGAACCGAAATTGAGCCGGATGATCCAGAGGCCACCCCTGTTCCTGATCATCTTCGAGGCGAAGTTAAACTTAAGCATGTGGACTTCTCTTACCCCACGCGGCCCGATATGGCTATTTTTTGCGACCTCAGCCTTCGTGCGAGGGGAGTCATGATTGATGGAAAGGACATAAGGAGATACAATCTCAAGTCTCTAAGAAGACACATTGCTGTGGTACCTCAGGAGCCATGCTTGTTTGCGACAACTATTTATGAAAACATTGCCTACGGACATGACGTGGCCTCTGAAGCGGAGATAGTGAAGGTTGCGACTCTTGCCAATGCTCATAAGTTCATATCTTCTCTTCCAAATGGATACAAAACATTTGTTGGGGAGAGAGGAGTTCAACTTTCTGGGGGACAAAAGCAAAGAATAGTAGTTGCTCGGGCTTTTGTGAGCAAGGCTGAGCTTATGCTTCTTGACGAAGCAACTAGTGCGCTCGACGTTGAATCTGAGAGGTGGGTTCAGGAGGCTCTAGACCATTCCTGGTCGGGGAAAACAAACATCGTTGTTGCACACATGCTATCAACCATCAGAAATGCCAACCTGATTGCTGTGATTGATGATGGCAAAGTAGCTGAACAAGGCTCGCATTCGCACTTGTTGAAGAATCATCCTGATGGGGTTTATGCGCACATAATTCAATTACAAAGATTCACACATACCCAAGTTATTGAGATGGCATCCGGTTTAAGTTCTTCAACAAGGCCAAAAGATGTCGAAAGACAAGATAATGTGTATGTCAACTTGTCACAGGATAATCTTGAAAGAGCAAACGGACATATATTCAATGTAGGAAACCCAGACAATGAAGTATCCATGAAGGAACTAGTTGAGCTTATGATACAGGTTTTCTCTGATCTGGAGTGTTCTGTATGTAGGATGGTACATCGGCAGGTTGCCACAATTGCTTGGTTGGAAGCTGATTCTGTGTGTGGCAGTCACTCTGTTGTAATTCCTTTAGTGCTTGTCTTGCCTTATCTTTTCCGTCTAAACCAATGTCACCGTCAGTACAAAGATACCGGGGAGAAAACTTGTCTTTTGAATGCCTTCCTAGCCACCTCCTCTCATGGTGCCTATTACTATTATCAACGGAGCTACTGCCAAAAGAGCTGCTTTATATTTTCTTGTGCTACATTTGCAATATGTTTGGATGGAACATTGCCTGCCTATCACTTTCATCCTGGATCTGGATCCGGATCAGGAGCCAATAGTTGGCTCATTGACTTAGAGCCCCAAATCGAAAGTCACTAG 1401 0.4483 MVLMVSANGVAKTLTLAPDFTMGGRALRSVFDLLDQRTEIEPDDPEATPVPDHLRGEVKLKHVDFSYPTRPDMAIFCDLSLRARGVMIDGKDIRRYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDVASEAEIVKVATLANAHKFISSLPNGYKTFVGERGVQLSGGQKQRIVVARAFVSKAELMLLDEATSALDVESERWVQEALDHSWSGKTNIVVAHMLSTIRNANLIAVIDDGKVAEQGSHSHLLKNHPDGVYAHIIQLQRFTHTQVIEMASGLSSSTRPKDVERQDNVYVNLSQDNLERANGHIFNVGNPDNEVSMKELVELMIQVFSDLECSVCRMVHRQVATIAWLEADSVCGSHSVVIPLVLVLPYLFRLNQCHRQYKDTGEKTCLLNAFLATSSHGAYYYYQRSYCQKSCFIFSCATFAICLDGTLPAYHFHPGSGSGSGANSWLIDLEPQIESH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01606 466 Pfam ABC transporter 85 194 IPR003439 GO:0005524
Adu04g01606 466 PANTHER ABC TRANSPORTER B FAMILY 1 84 - -
Adu04g01606 466 Gene3D - 47 82 IPR027417 -
Adu04g01606 466 Gene3D - 86 267 IPR027417 -
Adu04g01606 466 PANTHER BRACHYTIC2 1 84 - -
Adu04g01606 466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 5 263 IPR003439 GO:0005524
Adu04g01606 466 ProSitePatterns ABC transporters family signature. 166 180 IPR017871 GO:0005524
Adu04g01606 466 Pfam Pectinacetylesterase 429 460 IPR004963 GO:0016787
Adu04g01606 466 PANTHER ABC TRANSPORTER B FAMILY 86 269 - -
Adu04g01606 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 266 IPR027417 -
Adu04g01606 466 Gene3D ABC transporter type 1, transmembrane domain 2 46 IPR036640 GO:0005524|GO:0016021
Adu04g01606 466 Pfam EXS family 330 400 IPR004342 GO:0016021
Adu04g01606 466 PANTHER BRACHYTIC2 86 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01606 Adu-Chr4 72071195 72077686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01606 1 288 Calmodulin-binding Proteins AT2G36910 71.160 7.76e-154 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01606 K05658 - gmx:100814667 473.011