Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01602 ATGTCGTTCCGTTCACACAATCGACTTGGCTCAGAGACCCTCCCCATGAGCGCCCATAAACTGCTGAGCTCCTGCCCCATTCTACAAAAGCCAGGCTATAAATCCTCTGGAGCTATCCATGGATGCTCTAAAGGAAATCCATTCACGATTTATGAAGACTTTCCACCACATCCACAGGAACAGATTTATGATCTTGGAGGTGGAATCAACCAAATTCCAGGGGAATGTACTATTTCAGGAGATGTCATGTTAACCCTATTTTACAATGTGAAGGATGTAGTAACAAAGCTGCAAGAATATGTGGACAACATTAATCTCAACATATATAAGCTAGAAACACGGGGTCTTGTTTCAAAATATGTCTTTCCTGATGATGACTTAAGGGGAAGGTGCACAATGGTAAGTGGTGGTGGCCGTATTAGGCCTCAAAAGGATCCACTTAATAACCCCATTGATATGGTAGTTGGTACCCCTGGAAGGATTCTTCAACATATTGAGGAGGGCAACCTGGTGTATGGCGACATCAAATACTTGGTCTTGAATGAGGCAGATATAATGTTTGATCGTGGCTTTGGTCCTGATATATGCAAATTTCTGGCCCCATTGAAACATCGTGCATCAAAGTCTGATGGCCTAGGTTTTCTGACCATCTTGGTAACCGCAACAATGACAATGGCTGTGCAAAAGCTAATTGATGAGGAGTTTCAGGGCATTGTTCTGAGAACAAGCTGGAAGCATTACTTCAGTTACTTGTGCCAAGCCGAGCAAAAGGCAACAAGGGGTCTGGACTTGGATGTAGATCATGTTGTTATGTTTGACTTCCCCTTGAACTCTATCGATTACCTTCATCGGACTGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAAGTAACCAGTTTGGTTACAAAGAAGGACTTGATCTTGGCGACTAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAGGCTATCATGAAAGAAGGAGTACGAAGGGATATCGCCAGGACCCAAGTTAATGGGCAGAGTGGGAAGGACAGAAAATTAGTTAAAGTTTCTAAAGTTAAGAACAATCCTGGTGGACGTGCCAGTTTAGGGAATAAATGA 1107 0.4336 MSFRSHNRLGSETLPMSAHKLLSSCPILQKPGYKSSGAIHGCSKGNPFTIYEDFPPHPQEQIYDLGGGINQIPGECTISGDVMLTLFYNVKDVVTKLQEYVDNINLNIYKLETRGLVSKYVFPDDDLRGRCTMVSGGGRIRPQKDPLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLNEADIMFDRGFGPDICKFLAPLKHRASKSDGLGFLTILVTATMTMAVQKLIDEEFQGIVLRTSWKHYFSYLCQAEQKATRGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVTKKDLILATRIEEAMRKNESLEAIMKEGVRRDIARTQVNGQSGKDRKLVKVSKVKNNPGGRASLGNK 368
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01602 368 Gene3D - 86 239 IPR027417 -
Adu04g01602 368 Pfam Helicase conserved C-terminal domain 254 292 IPR001650 -
Adu04g01602 368 Pfam DEAD/DEAH box helicase 130 230 IPR011545 GO:0003676|GO:0005524
Adu04g01602 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 304 IPR027417 -
Adu04g01602 368 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 255 352 - -
Adu04g01602 368 MobiDBLite consensus disorder prediction 339 368 - -
Adu04g01602 368 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 93 241 IPR014001 -
Adu04g01602 368 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 255 352 - -
Adu04g01602 368 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 128 243 - -
Adu04g01602 368 SMART helicmild6 193 292 IPR001650 -
Adu04g01602 368 Gene3D - 254 358 IPR027417 -
Adu04g01602 368 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 128 243 - -
Adu04g01602 368 Coils Coil 312 332 - -
Adu04g01602 368 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 160 334 IPR001650 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu04g01602 Adu-Chr4 71565268 71570942 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01602 136 201 Eukaryotic Initiation Factors Gene Family AT3G13920 39.130 8.20e-07 48.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01602 - - pvu:PHAVU_004G0886001 201.83