Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01586 ATGTTGTTGAGGGCATTGCATATTGGCAAGTCTGAGGCACGTGACTATCTTGCTCACGATCCTCTTGTTGTGGCACTGGTGATCAAGTTTTTCAATTCTACAAAAGCACTTGCTTCCATTTGCCACATACAGTTAATTCTGGCGGCTGCATGTGTAGCTAAAGATCGCAAGTGCACCACTTTTCCTCCTGTCAAACCGGCATTGGTTGCCTCCGGTGTTCGTTGCGTTGAACCAGACACCATGGCACCAACAATGGTATATGGACTCAAACATAGAGTGTCTGAGGTCTCACTTGTTGATCTTCAAGGTGATGAGGACCACGCCTTCAGGAAGATTAGACTGAGAGCAAAAGATGGAATGGATTTTACTACTGACAAACTGAGGTCACTTGTTAAGAAATGGAAAACTTTGATTGAAGCTCATGTGGATGTGAATACCACTGATAATTACACTTTGAGGATGTTCTATATTGGGTTTAGCAGATGTTTTAACCAGATGAAAAAAAAACCTGCTATGCTCAATCAAGCCAGATTCGTTAGGTTAGTATCATTGTATAGGCTGATCCAGAGGTATTGGGTGATAAACAAGTACAGTCAGTTGTTGAAGGAAGGTTGTGACTCTGCAACTTCTGTTAGAGAAGCAGTATTGGAACTTATCGGCAGACACATTGATTCACATCCAGATGTGGGTTTTAAGGTCCTACTGGTAGGGCAAGCAGCCCTGCCGGGAAGGAACAAGGGAATGATCACTGATACAATTGTTAAGGCTAAGAGTTTTCTTGATGGTGATGAAGATCAACATGAAAAAGATGTGTTCGAGAAGAATCTGAAGGTGCTTGAAAACATTTTTTTAGTCATTATGCCAAGATTGGAAGATTAA 879 0.4175 MLLRALHIGKSEARDYLAHDPLVVALVIKFFNSTKALASICHIQLILAAACVAKDRKCTTFPPVKPALVASGVRCVEPDTMAPTMVYGLKHRVSEVSLVDLQGDEDHAFRKIRLRAKDGMDFTTDKLRSLVKKWKTLIEAHVDVNTTDNYTLRMFYIGFSRCFNQMKKKPAMLNQARFVRLVSLYRLIQRYWVINKYSQLLKEGCDSATSVREAVLELIGRHIDSHPDVGFKVLLVGQAALPGRNKGMITDTIVKAKSFLDGDEDQHEKDVFEKNLKVLENIFLVIMPRLED 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01586 292 Gene3D - 6 130 IPR029062 -
Adu04g01586 292 PANTHER 40S RIBOSOMAL PROTEIN S3A 88 224 - -
Adu04g01586 292 SUPERFAMILY Class I glutamine amidotransferase-like 11 78 IPR029062 -
Adu04g01586 292 SMART Ribosomal_S3Ae_2 70 237 IPR001593 GO:0003735|GO:0005840|GO:0006412
Adu04g01586 292 PANTHER 40S RIBOSOMAL PROTEIN S3A 88 224 - -
Adu04g01586 292 Pfam Ribosomal S3Ae family 86 171 IPR001593 GO:0003735|GO:0005840|GO:0006412
Adu04g01586 292 Pfam DJ-1/PfpI family 14 78 IPR002818 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01586 Adu-Chr4 69921764 69925443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01586 88 224 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 52.941 1.59e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01586 K02984 - gmx:100805519 134.806