Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01584 ATGCCTTCACCTCCCTCATCCTTCGCAACCATTTCTCGTAACCGCACTGTCTTCTCTAGAAAATGGACCAACAAGGAATACGCAATCGCATTCACAAGCTTCTCCTTCACACTCATCCTCTTCTCTCTCACTCGCCGCCCAAACCTCCAAGAACCTTCTAGAGTCTCTTCCTCCAATCACCTTGTTCCCTTGACCCTCCTCTCAAATGCCACCCAAAGAGGCGCACTTTGCTTGGATGGGAGTGCCCCTGGGTACCACTTTCAGAAGGGATTCGGGTCCGGATATCAAAATTGGCTACTTCACATTGAGGGAGGTGGGTGGTGTGATTCGGTAGCTTCGTGTTATCAGCGAAAAATGACTGCGTTGGGTTCGTCCAAGCACATGGAAACAGAGGTTCCTTTCTCTGGAATATTAAGCTCTGACCCTTCTCAAAATCCTTATTTCTTTAACTGGAACAAGGTGAGGGTACGCTATTGTGATGGTGCATCTTTTGCTGGCCACCAAGAAAGTGAGATTAAGGATGGAAATGGGTTGTTCTTCAGAGGCCAGATCATTTGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCACTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTAATACATTGTGATGACTTCCGAAAATATTTTTCGAAAGACATAAATGTTAAATGTCTTGCTGATGCTGGGTTTTTCCTAGACGAGGAGGATGTTCTTCGAAATAGGACAATGAGATCTTTCTATCATGACGTTGTTCAGCTTCAGGGTGTTGCAAAAAGTTTACACAAAGATTGCATTGCTAGAATTGAACCATTTAAGTGTCTTTTTCCATTAGAAATTGTTAAGAACATAAAGACTCCAGTTTTTTTTGTCCACCCTGCTTATGATTTTTGGCAGATACAAAATATTTTGGTACCTCATGGTTCAGACCCCCATGGTTACTGGAAAAGCTGCAGATTGAACATTCCCAATTGCAATGCTGATCAGTTTGATGTACTTCATGGTTTCCGTAAATCATTGCTGAAGAGACTTGACGAGTTCCAGCAACGAAAGGAGATTGGAATGTTCATAAATTCCTGCTTTATTCATTGCCAGACAGGGATGGGAGAGACATGGCACTCCCACAATTCCCCTAAAATAAATGATAAGACAATTGCTGAAACTGTTGCTGATTGGTACTTTGACCGCAAAGTTCTCAAGCTAATTGACTGCCCTTATCCATGCAATCCCACTTGCCGCAATATGGATTTCACCAGAAAATAG 1293 0.4308 MPSPPSSFATISRNRTVFSRKWTNKEYAIAFTSFSFTLILFSLTRRPNLQEPSRVSSSNHLVPLTLLSNATQRGALCLDGSAPGYHFQKGFGSGYQNWLLHIEGGGWCDSVASCYQRKMTALGSSKHMETEVPFSGILSSDPSQNPYFFNWNKVRVRYCDGASFAGHQESEIKDGNGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLATLIHCDDFRKYFSKDINVKCLADAGFFLDEEDVLRNRTMRSFYHDVVQLQGVAKSLHKDCIARIEPFKCLFPLEIVKNIKTPVFFVHPAYDFWQIQNILVPHGSDPHGYWKSCRLNIPNCNADQFDVLHGFRKSLLKRLDEFQQRKEIGMFINSCFIHCQTGMGETWHSHNSPKINDKTIAETVADWYFDRKVLKLIDCPYPCNPTCRNMDFTRK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01584 430 PANTHER NOTUM-RELATED 23 422 IPR004963 GO:0016787
Adu04g01584 430 Pfam Pectinacetylesterase 56 407 IPR004963 GO:0016787
Adu04g01584 430 PANTHER PECTIN ACETYLESTERASE 4 23 422 - -
Adu04g01584 430 SUPERFAMILY alpha/beta-Hydrolases 184 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01584 Adu-Chr4 69670898 69680754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01584 20 394 Carbohydrate Esterase AT3G09410 59.269 6.51e-170 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01584 K19882 - qsu:111992987 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01584 04 69670898 69680754 Adu04g01584 04 69670898 69680754 ECH