Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01578 ATGAACGGGAAAGCCTCAATCTCCAAGGAGCTTAATGCCAAGCATACCAAGATCTTAGAAGGACTTATGAAGCTACAAGAAAATAGGGAATGTGCAGACTGCCGGAACAAGGCACCACGATGGGCGAGTGTGAACCTAGGGATATTTATTTGCATGCAATGTTCCGGGATACACCGAGGTCTTGGAGTGCATATATCCAAGGTGCGATCTACAACCTTGGATACATGGTTGCCCGATCAAGTTTCTTTCATGCAATTTATGGGTAATGAAAAATCAAATAAGGATTGGGAGGCAAAGCTGCCCCCCAATTTCGACAGAGGCACAATGGGAATTGAGAAATTTATTTATTCCAAGTATGTGGAGAAAAAGTGGGCTTCAAAAGAAGGATTAATTAGTGGAGCTACAAATTATTTCCCGAAGAACATTAGTAGGAAACTTTCTTTAGAAGAAAGCATTCTTTCCAAACACGTGGCACAAGTTCTGCCTCCATTGACACGAGCTCATGGTGGGGTGACGGCGGTTACTGGAGGGGGTGGTGGCGGAGAAAGAAAAAGAGGAGGAAGAGGAAAAGAAAGAGGATATCTAGAACCTCTCAAAGATGGCCATGAAGAAGAACATGGAAATGAGAATGGAAGTGGCAATGAAACCAAAGGAAACTGCATTACCGGAGCTATCAAAGTTGGACCAATGTTGAGGAAGATTTTCATCAACCATCTTGTGCACCTTTATTCACTGCTACTATGGTGCTCCAATGGATGCCCATCCCTGACCACCAATTTTaaacattaa 789 0.4309 MNGKASISKELNAKHTKILEGLMKLQENRECADCRNKAPRWASVNLGIFICMQCSGIHRGLGVHISKVRSTTLDTWLPDQVSFMQFMGNEKSNKDWEAKLPPNFDRGTMGIEKFIYSKYVEKKWASKEGLISGATNYFPKNISRKLSLEESILSKHVAQVLPPLTRAHGGVTAVTGGGGGGERKRGGRGKERGYLEPLKDGHEEEHGNENGSGNETKGNCITGAIKVGPMLRKIFINHLVHLYSLLLWCSNGCPSLTTNFKH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01578 262 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Adu04g01578 262 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 174 - -
Adu04g01578 262 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Adu04g01578 262 MobiDBLite consensus disorder prediction 169 219 - -
Adu04g01578 262 MobiDBLite consensus disorder prediction 183 211 - -
Adu04g01578 262 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Adu04g01578 262 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Adu04g01578 262 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 174 IPR044520 GO:0005096
Adu04g01578 262 CDD ArfGap 19 119 - -
Adu04g01578 262 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Adu04g01578 262 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Adu04g01578 262 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Adu04g01578 262 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01578 Adu-Chr4 69111087 69119698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01578 19 147 C2H2 Transcription Factor Family AT4G21160 38.406 1.82e-23 95.5