Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01571 ATGCTTGAGTTGAAAACAGAAGCGTGCTGTCTGGAGAATAAGCAATCCACTGCTGCTTCTTGCTCCTCTGTTTCCGAAGGCAGTGGCAGCCCAATTAACAAGTCCACAGAGATGTGTAGCCCTGCATCTACATCGCCCTTACACCGGAGGACCACTGGCCCTATAAGGCGTGCAAAGGGAGGTTGGACAGCAGAAGAGGATGAGACATTAAGGAATGCTGTTGCAACTTACAAGGGCAAGAATTGGAAGAAAATTCTATATTTTCCTGATAGAACAGAAGTTCAATGCCTTCACAGATGGCAAAAAGTTCTCAATCCAGAACTTGTTAAAGGTTTTGTGCAGGAGGATGATAAAATTGTTGAACTGGTCTCCAAATTTGGGCCTACAAAATGGTCTCTTATAGCCAGGTCTTTGCCTGGTCGAATAGGGAAACAGTGCCGAGAGCGATGGCACAATCATCTTAATCCTGACATAAAGAAAGATGCCTGGACTTTGGACGAGGAATTGGCCCTGATAAATGCTCATCATACCCATGGGAACAAATGGGCTGAAATAGCCAAGGTTCTTCCTGGAAGAACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTAGCTACAGGAAGACTTCCACCAGTGCCAAAGAACAATGCACAAGTTGCTGTCAAAGATACAATTAGACTTTCTACTTCTAAAACAATTCCGGTTTGTTCAAGTAAAGAATTAAATTTAGCTGTTAAAACACCATCTGAACCTACAACTATTAGTATGCTAGATGAGAGTGGCATGAATCAGTCATCCCCAGGGACAGTTAGAGATGTTCGTGATTCTTCAAGTGTTCCTGCTAATGAATCTGCTGATTCTGACGGTGTAGAATGCAAACCTGGATCATCCAACATAGATCTCGCCTGTAGCAACTCAAAGCCTGTGTCAATAGTTAATTTCAGAATAACTTGTGGGACAAATTTTGAGAATTCTGGACTAAGTGTAAACTCAAAGTTTGAGCGGTGTGTAGACAATTGTGAAATGAGTTGCAGCAGCAGGTCTATCAGAACAACTTTCTCCCAAGAAAGTCCTACCTGTGGTTCTTTGTGTTATGAGCCGCCTCAGTTAAGTGGTTCAGTTCCTTTAGATTATCTTTCTTTAAGCCTGCAGAATGAGTACTGCTCTAATCCGATGTTGTCGCCTATCGATTACTTCACTCCAGCTAGTGTGAAGGGTAGTGAATTATGCAGTGAGACACCTGAATCATTTTTGAAAAAAGCTGCTGATACTTTTCCAAACACTCCTTCCATATTGAGGAGGAGACGGAACAGAGTCGAAACACAAACCCCTCCTTGTAAACTTTTGAAGGTAGAAAATCATTCTTGTACTTCTAATGAATCAGAGAGAACCAAGGATAATTCTGGTTCTGAGGTTGGGAGGTTCTCTGAGAATCCAGCAAGCCATGACAATGAGAGTGACCTTCCCAAGGCTTACAATGCATCTCCACCATACCAGTTGAGATCCAAGCGAACAGCTGTTCTCAAGTCCGTGGAGAAACAACTAGAATTTGCATTTGAGGAAAAAAAAATGAAAGCAATTTCAACTGAATGA 1620 0.4173 MLELKTEACCLENKQSTAASCSSVSEGSGSPINKSTEMCSPASTSPLHRRTTGPIRRAKGGWTAEEDETLRNAVATYKGKNWKKILYFPDRTEVQCLHRWQKVLNPELVKGFVQEDDKIVELVSKFGPTKWSLIARSLPGRIGKQCRERWHNHLNPDIKKDAWTLDEELALINAHHTHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGRLPPVPKNNAQVAVKDTIRLSTSKTIPVCSSKELNLAVKTPSEPTTISMLDESGMNQSSPGTVRDVRDSSSVPANESADSDGVECKPGSSNIDLACSNSKPVSIVNFRITCGTNFENSGLSVNSKFERCVDNCEMSCSSRSIRTTFSQESPTCGSLCYEPPQLSGSVPLDYLSLSLQNEYCSNPMLSPIDYFTPASVKGSELCSETPESFLKKAADTFPNTPSILRRRRNRVETQTPPCKLLKVENHSCTSNESERTKDNSGSEVGRFSENPASHDNESDLPKAYNASPPYQLRSKRTAVLKSVEKQLEFAFEEKKMKAISTE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01571 539 MobiDBLite consensus disorder prediction 21 55 - -
Adu04g01571 539 SMART sant 113 156 IPR001005 -
Adu04g01571 539 SMART sant 159 207 IPR001005 -
Adu04g01571 539 SMART sant 58 106 IPR001005 -
Adu04g01571 539 MobiDBLite consensus disorder prediction 21 50 - -
Adu04g01571 539 Gene3D - 113 159 - -
Adu04g01571 539 Gene3D - 54 111 - -
Adu04g01571 539 CDD SANT 162 205 IPR001005 -
Adu04g01571 539 PANTHER MYB PROTEIN-RELATED 19 473 - -
Adu04g01571 539 Pfam Myb-like DNA-binding domain 160 203 IPR001005 -
Adu04g01571 539 Pfam Myb-like DNA-binding domain 59 104 IPR001005 -
Adu04g01571 539 Pfam Myb-like DNA-binding domain 114 154 IPR001005 -
Adu04g01571 539 CDD SANT 62 104 IPR001005 -
Adu04g01571 539 Gene3D - 161 227 - -
Adu04g01571 539 SUPERFAMILY Homeodomain-like 133 210 IPR009057 -
Adu04g01571 539 MobiDBLite consensus disorder prediction 261 293 - -
Adu04g01571 539 MobiDBLite consensus disorder prediction 465 479 - -
Adu04g01571 539 CDD SANT 114 154 IPR001005 -
Adu04g01571 539 MobiDBLite consensus disorder prediction 459 511 - -
Adu04g01571 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 104 IPR017930 -
Adu04g01571 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 209 IPR017930 -
Adu04g01571 539 ProSiteProfiles Myb-like domain profile. 155 205 IPR001005 -
Adu04g01571 539 PANTHER MYB-RELATED PROTEIN B-LIKE 19 473 - -
Adu04g01571 539 SUPERFAMILY Homeodomain-like 55 110 IPR009057 -
Adu04g01571 539 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Adu04g01571 539 MobiDBLite consensus disorder prediction 261 302 - -
Adu04g01571 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 154 IPR017930 -
Adu04g01571 539 ProSiteProfiles Myb-like domain profile. 114 154 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01571 Adu-Chr4 68517757 68521502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01571 49 533 MYB Transcription Factor Family AT5G02320 48.810 2.20e-126 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu04g01571 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01571 K09422 - gmx:778081 759.599