Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01565 ATGCTCACTTCATCCAAATTCTTTTGGGATTCATCAGCCCCTTTTGATCATCTTCATTATTCCGtatccatggctgccgaccaagttggtcttgacaacctACTATCCAAGTTCCTCCTTGGGGATTATGAGGAAAGCTCCACCACTCCTCCCGTAGATCCCGCGGCTGCACTTGGTCCTGAGGTTCAGTCCTGCCCTCCTCAGGGGGAAGTCGCTGGGACCATCTCCAATCCGGTTCCCCAGCAgaagaggcctcgggggagggaggagATAATGATGTGCTTTGATATGCTACTTGGAAAATCATCAGCATCCGCATGCTACGGGTACGAGGACGAGGGAACGATGATTGCAGCTGCAAGGGAGGGAATATACAACAATGGAGGTGCATGTGGCCAAATGTATAAGATCACATGCACAGGTGCGACCAACGCCGGCGTCACTCAACCGTGCACCGGCGCCAGTGTTACCGTCAAGGTTGTCGATCTTTGTCCCTCTCCAGGCTGCCAGGGAACATTTGATCTCTCTCAAGAAGCTTTCTCTACGATAGCTAACATCAATGCTGGAAAAGTTGATATTGACTGTACCCCGTAA 594 0.4512 MLTSSKFFWDSSAPFDHLHYSVSMAADQVGLDNLLSKFLLGDYEESSTTPPVDPAAALGPEVQSCPPQGEVAGTISNPVPQQKRPRGREEIMMCFDMLLGKSSASACYGYEDEGTMIAAAREGIYNNGGACGQMYKITCTGATNAGVTQPCTGASVTVKVVDLCPSPGCQGTFDLSQEAFSTIANINAGKVDIDCTP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01565 197 SUPERFAMILY Barwin-like endoglucanases 103 194 IPR036908 -
Adu04g01565 197 Gene3D - 96 196 IPR036908 -
Adu04g01565 197 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 100 197 IPR007112 -
Adu04g01565 197 Pfam Lytic transglycolase 119 193 IPR009009 -
Adu04g01565 197 SMART dpbb_1 117 195 IPR007112 -
Adu04g01565 197 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 102 195 IPR044206 GO:0009627|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01565 Adu-Chr4 68319027 68322304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01565 79 194 Expansin Gene Family AT5G39310 31.298 3.34e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01565 - - adu:110280746 224.172