Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu04g01553 | ATGGTTTATACTTCCATCCCAGCATATATTGATCCAGTCAATTGGCATCAGCAACAGCAACCAAATCATCAACAAAACAACACAGGTGGCACAAGCTCTCAACTTCTTCATCCTCCACCACCACCTCTTCCGCCATCGACTCAACAACATGGAGCCAGTACTAGCTCCATCAGACCTGGGTCGATGGCGGACAGGGCAAGGATGGCTAACATACCCATGCAAGAGCCAGCACAAAAGTGTCCAAGATGTGAATCTACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCCCGGCACTTCTGCAAGACCTGCCGGAGGTACTGGACCCGAGGCGGCGCTTTGAGAAATGTTCCGGTCGGCGGCGGCTGCCGGAGGAACAAGAGGACTAAAGGAACAACCACCAGCAACAACGGCTCCAAGTCACCACCACCGAGCTCTGATCGCGGAGGTCCCACCGTCTCTGGTGGCAGCTTTGCCTCTGAAATCGCAGGCCTAAGCCCTCCGGTGCCCTCGTCGCTGAGATTCATGGCTCCATTAATGCATCATCAGCAACTTGGAGATCACTTTTCAGGAGTTGGTGGCGGTGATTTAGGCCTAAACTACGCCGCAATTTCTGGTCCAATGGGAGGAATGGGTGACTTAAATTTTCACATAGGAAGTGCTTTGCGCAGTGATGTCACCGGTGGCGGCAATGGAGGCAGTTCTCTTCTATCAGCTGCAGGTTTGGAACAATGGAGGGTTCCACAAACACAACAATTTTCTTTCTTGACAGGTTTCGAAGCTTCATCACATGGCCTATACCAATTTGAAAATAGTACTAGTGAGGGTTCTGGATACGGCGGAGGCAGCAGTGGTGGTGGCGGTGCTATTCGGCCGAATAAGGTGTCGACTTTTGCCTCAGTAGTGAAGATGGAAGAAAGTAATAATAATTTGCCAAGGCAGTTTTTGGGGATGAATAATAATTCATCAAGTAATAGTGAGCATTTTGTTCCTGCTTCTTGGACACACCTTTCTGGTTTTACTTCTTCCAATACTACCAATAATCCTCCATAG | 1065 | 0.4911 | MVYTSIPAYIDPVNWHQQQQPNHQQNNTGGTSSQLLHPPPPPLPPSTQQHGASTSSIRPGSMADRARMANIPMQEPAQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTKGTTTSNNGSKSPPPSSDRGGPTVSGGSFASEIAGLSPPVPSSLRFMAPLMHHQQLGDHFSGVGGGDLGLNYAAISGPMGGMGDLNFHIGSALRSDVTGGGNGGSSLLSAAGLEQWRVPQTQQFSFLTGFEASSHGLYQFENSTSEGSGYGGGSSGGGGAIRPNKVSTFASVVKMEESNNNLPRQFLGMNNNSSSNSEHFVPASWTHLSGFTSSNTTNNPP | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu04g01553 | 354 | MobiDBLite | consensus disorder prediction | 119 | 165 | - | - | |
Adu04g01553 | 354 | Pfam | Dof domain, zinc finger | 77 | 132 | IPR003851 | GO:0003677|GO:0006355 | |
Adu04g01553 | 354 | ProSiteProfiles | Zinc finger Dof-type profile. | 78 | 132 | IPR003851 | GO:0003677|GO:0006355 | |
Adu04g01553 | 354 | PANTHER | DOF ZINC FINGER PROTEIN DOF3.6 | 6 | 350 | - | - | |
Adu04g01553 | 354 | ProSitePatterns | Zinc finger Dof-type signature. | 80 | 116 | IPR003851 | GO:0003677|GO:0006355 | |
Adu04g01553 | 354 | MobiDBLite | consensus disorder prediction | 17 | 59 | - | - | |
Adu04g01553 | 354 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 6 | 350 | IPR045174 | GO:0003700|GO:0006355 | |
Adu04g01553 | 354 | MobiDBLite | consensus disorder prediction | 131 | 157 | - | - | |
Adu04g01553 | 354 | MobiDBLite | consensus disorder prediction | 17 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu04g01553 | Adu-Chr4 | 66635020 | 66636709 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu04g01553 | 1 | 274 | C2C2-Dof Transcription Factor Family | AT2G37590 | 41.158 | 1.61e-51 | 172 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Adu04g01553 | zf-Dof | 8.9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu04g01553 | - | - | aip:107639364 | 602.438 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu04g01553 | 04 | 66635020 | 66636709 | Adu04g01553 | 04 | 66635020 | 66636709 | ECH | |
Adu04g01553 | 04 | 66635020 | 66636709 | Adu02g01707 | 02 | 73046090 | 73047794 | PCT |