Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01549 ATGGCGGTTCTGAACGCTTTCTCTCTTTCCTTCTTCTTCTTGGTTTTCGTCACTTTTGTTGTTTCCATTTCCAGTGAGCCTCTTCCCCAACCTGTGGTTTCTTCCACTGATGTTGAACTCCTATTGTTCAAAATCAAGTCTTCACTCCAAGGAAACACTAATGGAGAAGAAAACCTTGTCTTATCTTCATGGAACTCTTCAGTTCCACTATGTCAATGGAGAGGTCTCAAATGGATCTTCTCCAGCGGCACACCTTTGTCATGCACTGATCTCTCATCACCACAATGGACCAATCTCTCACTCCACAAAGACCCTTCTCTTCACTTACAATCCCTTCAGCTTCCTTCTGCAAATCTATCTGGTTCTCTCCCCAGAGAGCTTGGTGAATTTCCATTGCTTCAAAGCCTCTACCTTAACATTAACTCCTTGAAAGGAACGGTTCCTCTTGAAATTGGTTACAGTACCTCATTATCTGACATTGATTTTGGTGATAATCTTTTGACTGGGCAGATTCCTGCTTCAATTTGGAATCTTTGTGATAGACTTGTTTCTCTTAGGGTTCATGGAAACTCCTTCTCTGGGAATGTTCCAGAACCTGCATTGCCTAACTCTTCTTCTTGTAAGAGTCTTCAGTTTCTTGATTTGGGTGATAACAGGTTCTCTGGGGAGTTTCCTGAGTTTGTTACGAAGTTTGGTGGGTTGAAGCAGCTTGATTTAGGGAACAATATGTTTGTTGGTTCAATTCCTCAGAGCTTATTTGGGCTAAAGCTTGAAAAATTGAACCTTTCTCATAATAACTTCAGCGGGGTTTTGCCATTTTTTGGGCAGAACAAATTTGGGGTTGATGTGTTTGAAGGGAATAGTCCTGACTTGTGTGGACCACCTTTGAGAAGTTGCACCAGAAACTCTGCACTGAGTTCTGGTGCAGTTGCTGGCATAGTTATTAGTCTTATGACTAGTGCAGTTGTTTTGGCTTCTTTGTTGATTGGTTATATGCAGAACAAGAAGAGGAAGGGTAGCGGAGAGAGTGAAGATGAGTTGAATGACGAAGAGGAAGATGATGAGAATGGTGGTGGTGGTGGGGCTGGTGATGGTGATGGGGGGGAAGGGAAGCTTATGATATTCAGCGGCGGCGAGAATTTGACGTTGGATGATGTGTTGAATGCGACTGGACAAGTCATGGAGAAGACATGTTATGGGACTGCTTATAAGGCGAAGCTTGCTGATGGGAGCACCATTGCTTTGAGGTTGTTGAGGGAAGGTAGCTGCAAGGATAGGAACTCGTGCTTGCCAGTTATAAAGCAGTTGGGCAAGATTCGTCATGAGAACTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAGAGAGGCGAGAAGCTCCTTATTTATGACTATTTTCCTCTTAGAACCCTTCATGAGCTTCTTCATGAAACTAAAGCAGGAAAACCAGTGCTGAACTGGGCTAGGCGACACAAGATCGCATTGGGAATAGCGAGAGGGCTGGCCTATCTTCATACAGGACTTGATGTACCGATCACTCATGCGAACGTAAGATCCAAAAATGTGCTAGTGGACGACTTCTTTGTTGCGAGGGTCACTGATTTTGGCCTTGATAAGCTGATGGTTCCTTCCATAGCCGACGAAATGGTAGCACTTGCTCGAGCAGACGGCTACAAGGCTCCGGAACTTCAAAAAATGAAGAAATGCAATTCCAGGACTGATGTTTATGCATTTGGTATACTGCTGCTGGAGATTTTGATTGGGAAGAAGCCAGGGAAAAACGGAAGAAATGGAGAGTTTGTTGACTTGCCTGCGATGGTGAAAGTGGCGGTTTTGGAAGAGACAACAATGGAAGTGTTCGATGTGGAGCTCTTGAAAGGAATAAGAAGTCCGATGGAAGATGGCATGGTGCAGGCACTGAAGCTGGCGATGGGATGCTGCGCACCGGTGGCGGCAGTTAGGCCGAGCATGGAAGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGGAACAGGTCTGCATTGTACAGCCCTACAGAAACAAGAAGTGGAACTGTTACCCCGTTTTGA 2067 0.4509 MAVLNAFSLSFFFLVFVTFVVSISSEPLPQPVVSSTDVELLLFKIKSSLQGNTNGEENLVLSSWNSSVPLCQWRGLKWIFSSGTPLSCTDLSSPQWTNLSLHKDPSLHLQSLQLPSANLSGSLPRELGEFPLLQSLYLNINSLKGTVPLEIGYSTSLSDIDFGDNLLTGQIPASIWNLCDRLVSLRVHGNSFSGNVPEPALPNSSSCKSLQFLDLGDNRFSGEFPEFVTKFGGLKQLDLGNNMFVGSIPQSLFGLKLEKLNLSHNNFSGVLPFFGQNKFGVDVFEGNSPDLCGPPLRSCTRNSALSSGAVAGIVISLMTSAVVLASLLIGYMQNKKRKGSGESEDELNDEEEDDENGGGGGAGDGDGGEGKLMIFSGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGSTIALRLLREGSCKDRNSCLPVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYFPLRTLHELLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHANVRSKNVLVDDFFVARVTDFGLDKLMVPSIADEMVALARADGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRNGEFVDLPAMVKVAVLEETTMEVFDVELLKGIRSPMEDGMVQALKLAMGCCAPVAAVRPSMEEVVRQLEENRPRNRSALYSPTETRSGTVTPF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01549 688 Gene3D Ribonuclease Inhibitor 179 254 IPR032675 -
Adu04g01549 688 Gene3D Ribonuclease Inhibitor 39 178 IPR032675 -
Adu04g01549 688 Gene3D Ribonuclease Inhibitor 255 303 IPR032675 -
Adu04g01549 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 688 - -
Adu04g01549 688 MobiDBLite consensus disorder prediction 669 688 - -
Adu04g01549 688 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Adu04g01549 688 MobiDBLite consensus disorder prediction 337 367 - -
Adu04g01549 688 MobiDBLite consensus disorder prediction 663 688 - -
Adu04g01549 688 ProSiteProfiles Protein kinase domain profile. 388 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01549 688 SUPERFAMILY Protein kinase-like (PK-like) 397 664 IPR011009 -
Adu04g01549 688 SUPERFAMILY L domain-like 74 274 - -
Adu04g01549 688 Gene3D Phosphorylase Kinase; domain 1 373 464 - -
Adu04g01549 688 MobiDBLite consensus disorder prediction 345 359 - -
Adu04g01549 688 Pfam Protein tyrosine and serine/threonine kinase 396 663 IPR001245 GO:0004672|GO:0006468
Adu04g01549 688 Gene3D Transferase(Phosphotransferase) domain 1 467 676 - -
Adu04g01549 688 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 7 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01549 Adu-Chr4 66009240 66012265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01549 13 688 Receptor kinase-like Gene Family AT3G24660 70.901 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu04g01549 PK_Tyr_Ser-Thr 4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01549 - - gmx:100814814 1072