Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01539 ATGATAGGTCATGGTGTCAACGACGCCCCTGCATTAAGGAGAGCAGAAATTGGAATTGCTGTTGCTGATGCTACAGACGCTGCTAGAAGTGCTTCTGATATTGTCTTTACTAAACCTGAAACTGCTAGAAGCCAAGACAAGCTGTTATTACTTGTTACATTTGCACAAATGCTCCTTTCTGCTCCAACTAAAAAGAATGACAATATGGAACCTGTATATCATCTTCCAGTGGAACAGAAAGCAGATGATTATTCATGGAGCCTTGTTATAGAGGCTCTTCTAGTAGGTAGTGGAACTTCATCAGATGAAGCAACCGGCTGCCCTTTGTCCAAGAAAGAGCAGGGGATTATACACATGGTTGCTGGATTGGGTTATGAGTGGGCGTTAATCCCTATTCTTAATTGTGGTGTGAATATAAATTTTCGTGACATCAGGGGGTGGACTGCCCTTCATTGGGTTGCACAGTTTGGAAGTGAAAAGACTCGCCCTTTAGCTATCGGGCTGTATGTAATATCTAGTCAGATGGGAAAAAATGGTTACTTCACTTATTGCGCTGGTGCATATGCTGGAGCAGTAACTGATCCAACATCTGCAAACCCAGTTGGGAAAACTGCTACAGCTATTGCTACCAGCAATGGTCATAAGGGACTAGCTGGTTATATTTTAGAAGTAGCTCTGACTAGCCATCTTTCATCTCTCACCTTGCCTCAAATGAAAATATTGTATTCACAGCTAATGGGGTTTCACTGGCTGATGTCAAAAATGCTGCTCTGGCTGCTGCTCGGATACAAGCTACATTTGTGCTCATTCTTTCAAAAACGGAGGGAGAGGGAAGCAGCAGCTGCTGTTGCTGCTAGTCTAGATAGGTACGATATCGATGCTGATGGCATTGGTAACATTCTAGAGCTTTCTCCCAGGTTAAGTCATAGCTTTGGGAGGCTTCGTGATTACAATGtgtaa 960 0.4323 MIGHGVNDAPALRRAEIGIAVADATDAARSASDIVFTKPETARSQDKLLLLVTFAQMLLSAPTKKNDNMEPVYHLPVEQKADDYSWSLVIEALLVGSGTSSDEATGCPLSKKEQGIIHMVAGLGYEWALIPILNCGVNINFRDIRGWTALHWVAQFGSEKTRPLAIGLYVISSQMGKNGYFTYCAGAYAGAVTDPTSANPVGKTATAIATSNGHKGLAGYILEVALTSHLSSLTLPQMKILYSQLMGFHWLMSKMLLWLLLGYKLHLCSFFQKRREREAAAAVAASLDRYDIDADGIGNILELSPRLSHSFGRLRDYNV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01539 319 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Adu04g01539 319 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Adu04g01539 319 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu04g01539 319 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu04g01539 319 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 38 102 - -
Adu04g01539 319 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 101 239 - -
Adu04g01539 319 Gene3D - 1 39 IPR023214 -
Adu04g01539 319 SUPERFAMILY HAD-like 1 40 IPR036412 -
Adu04g01539 319 PANTHER CALMODULIN-BINDING PROTEIN 101 239 - -
Adu04g01539 319 SUPERFAMILY Ankyrin repeat 114 221 IPR036770 -
Adu04g01539 319 Gene3D - 44 225 IPR036770 -
Adu04g01539 319 PANTHER CALMODULIN-BINDING PROTEIN 38 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01539 Adu-Chr4 64537677 64539862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01539 37 239 CAMTA Transcription Factor Family AT1G67310 45.494 7.83e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01539 K21596 - gmx:100786880 228.409