Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01530 ATGGTGGTGGTGATAGAGCAGCAAGAGATCAAGGATCGAAACGCCAATCCCTCCAGGGTGGTTGCCGGTAACGAGGCTTCCGATGGTTTTGAAACGGCCAGCGACACCGACCTTGGCAGTGACAACGGAGGGGATGACGTCGGATCTAGCAGCCATGATCAACCGCTCGAGCAACCGCAGCAGCAACATCAACGGCAGCAGCTGAAGATAGAACATTTGGAGGCGGAGCCGGAGCAGAGTGTTTCTCCAAGTAATAGTTGCCCTGGGGATCTCTTGATCAATGAGGAGTTGGAGAAGAAAGCAATGGTTCAAGCAAATGAAGCAAAGGCAGAAGGGAACAAGCTTTTTGTGGATGGGAAGTATGAGGAAGCATTATCCCAGTATGAACTTGCTTTACAAGTTGCATCTGACATGTCTTCATTGGTTGAAATACGCTCAATATGCCATGCAAACCGTGCTGTGTGCTTTCAGAAACTGGGAAAATATGACAACACAGTTAAAGAATGCACAAAAGCACTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGGGAAATGATGAAGGAAGAGATGATTGCAAAACTAAAAGAAATGGGAAATTCTTTCCTGGGCCGTTTTGGGATGAGTGTCGATAACTTCAAAGCAGTTAAAGATCCAAACACTGGTTCTTATTCTATCTCATTCCAGCATTAA 834 0.4496 MVVVIEQQEIKDRNANPSRVVAGNEASDGFETASDTDLGSDNGGDDVGSSSHDQPLEQPQQQHQRQQLKIEHLEAEPEQSVSPSNSCPGDLLINEELEKKAMVQANEAKAEGNKLFVDGKYEEALSQYELALQVASDMSSLVEIRSICHANRAVCFQKLGKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLEPLAAEKREMMKEEMIAKLKEMGNSFLGRFGMSVDNFKAVKDPNTGSYSISFQH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01530 277 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Adu04g01530 277 MobiDBLite consensus disorder prediction 1 67 - -
Adu04g01530 277 Pfam Tetratricopeptide repeat 150 177 IPR019734 GO:0005515
Adu04g01530 277 SUPERFAMILY TPR-like 104 223 IPR011990 GO:0005515
Adu04g01530 277 Gene3D Tetratricopeptide repeat domain 59 244 IPR011990 GO:0005515
Adu04g01530 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 49 277 - -
Adu04g01530 277 SMART tpr_5 105 138 IPR019734 GO:0005515
Adu04g01530 277 SMART tpr_5 180 213 IPR019734 GO:0005515
Adu04g01530 277 SMART tpr_5 146 179 IPR019734 GO:0005515
Adu04g01530 277 Coils Coil 56 76 - -
Adu04g01530 277 MobiDBLite consensus disorder prediction 29 66 - -
Adu04g01530 277 Pfam Tetratricopeptide repeat 181 213 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01530 Adu-Chr4 63678189 63682769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01530 74 249 Calmodulin-binding Proteins AT3G25230 34.536 1.51e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01530 K24926 - gmx:100808386 352.443