Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01528 ATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAAAGGGAATGTTTTTGTTAAGAACTTAGTTGAATCCATAGATAATGCGGAATTACATGATTTATTTCAAAAGTTTGGAAATATCTTGTCCAGCTTTGGAAATTGCTTTGGTGCTTCAAATTGGTTTAGAGAGAGTGTTGATAGTGATACTGCTGAGAAGCCACGGGAACGAGGTGATAGAATTGAGGTTGTGACTAATTGA 240 0.3833 MWSRRDPDVRKSGKGNVFVKNLVESIDNAELHDLFQKFGNILSSFGNCFGASNWFRESVDSDTAEKPRERGDRIEVVTN 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01528 79 SUPERFAMILY RNA-binding domain, RBD 2 43 IPR035979 GO:0003676
Adu04g01528 79 PANTHER POLYADENYLATE-BINDING PROTEIN 2 43 - -
Adu04g01528 79 Gene3D - 4 77 IPR012677 -
Adu04g01528 79 MobiDBLite consensus disorder prediction 60 79 - -
Adu04g01528 79 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 17 43 IPR000504 GO:0003723
Adu04g01528 79 PANTHER RNA BINDING PROTEIN 2 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01528 Adu-Chr4 63177682 63178026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01528 1 43 Eukaryotic Initiation Factors Gene Family AT4G34110 65.116 8.63e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01528 K13126 - aip:110271131 153.295