Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01521 ATGTTCTTGTCGCTAAATGGCCATCGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAACATTAAATTAGGAGATATCATTCCGGACGATGCTTGTCTTCTCAAGGGCAATCCTCTAATCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGCGTGCACACCATCTTTGGTAAAGCGGCTCACTTGGGGGATAGTGCTAACCAAGTTGGATACTTCTAG 237 0.443 MFLSLNGHRSEQDAAILVPGDIINIKLGDIIPDDACLLKGNPLIKKGEIEAVVIATGVHTIFGKAAHLGDSANQVGYF 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01521 78 Gene3D - 6 43 - -
Adu04g01521 78 SUPERFAMILY Calcium ATPase, transduction domain A 5 67 IPR008250 -
Adu04g01521 78 PANTHER PLASMA MEMBRANE ATPASE 6 43 - -
Adu04g01521 78 PANTHER PLASMA MEMBRANE ATPASE 44 78 - -
Adu04g01521 78 PANTHER CALCIUM-TRANSPORTING ATPASE 6 43 - -
Adu04g01521 78 PANTHER CALCIUM-TRANSPORTING ATPASE 44 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01521 Adu-Chr4 61813762 61814571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01521 6 78 Primary Pumps ATPases AT4G30190 57.000 5.32e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01521 K01535 - gmx:100794372 103.219