Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01442 ATGATTAATGGTGTTATTTCCTTGTGTTTCAGACTCTCTAGATATCAAATTACAGACCATCCAGCAATTGCTGTAGGCCAAGGTTGGCAATCCGGCCGCCATCGGGTGTTGGTCAAAGGGGTTGATATTGGGTTTCTTCTTTTGAGAACTTTGATTGGAAAGATATTTGGCAGCATTGGATCAGTGGGAGGAGGCCTTGCTTTAGGTAAAGAGGGTCCTCTTGTCCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGGTGGTTCCACTAAGTATCATATAAAATTCAAGATGGTTTCAGCAGGAGTTGCTGCTGCATTTAGAGCTCCTGTTGGTGGTGTATTGTTTGCATTGGAAGAGGTAACATCTTGGTGGAGGAATCAACTTATGTGGCGTGTCTTCTTTACTTCTGCAATTGTTGCTGTTGTAGTGCGAACTGCAATGGGATGGTGTAAGAATGGAAATTGCGGATATTTTGGGTCTGGCAGATTCATAATATGGGATATATATCAGAGTAAAGATCTGTGCTTTTACCTTTTTCACTGCCAGTTGAGCATTAAGGTTTTATTTTTGTCCTCTTCCCTTGACTGGTTTTATTTTTAG 606 0.4142 MINGVISLCFRLSRYQITDHPAIAVGQGWQSGRHRVLVKGVDIGFLLLRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHIKFKMVSAGVAAAFRAPVGGVLFALEEVTSWWRNQLMWRVFFTSAIVAVVVRTAMGWCKNGNCGYFGSGRFIIWDIYQSKDLCFYLFHCQLSIKVLFLSSSLDWFYF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01442 201 Pfam Voltage gated chloride channel 39 151 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu04g01442 201 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 7 177 - -
Adu04g01442 201 SUPERFAMILY Clc chloride channel 41 170 IPR014743 -
Adu04g01442 201 Gene3D Clc chloride channel 25 190 - -
Adu04g01442 201 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 7 177 - -
Adu04g01442 201 PRINTS Plant CLC chloride channel signature 122 130 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu04g01442 201 PRINTS Plant CLC chloride channel signature 136 146 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu04g01442 201 PRINTS Plant CLC chloride channel signature 154 161 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01442 Adu-Chr4 48125702 48127428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01442 13 179 Ion Channels AT5G26240 65.946 3.28e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01442 K05016 - adu:107484201 333.954