Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01438 ATGGAGAGTGGTGAGAGAGAATGTTACTATAGAATTCTTGGTGTGAGTTCTGATTCTTCGTTTCAAGAGATAAAGCGTGCTTACAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAAAAATCCTTCTTTGCTAGGGGAAGCCAAGCGCAAGTTCCAACAAATTCAAGAAGCTTATTCAGTATTGTCTGATCAAAAGAAAAGAACGATGTACGATGCTGGGTTGTATGATCCTGAGGAGGAAGAGGATGAGGAGAAGGAGTGTGGGCTTGAAGATTTGCAGTCCATGTTCATGGAAATGCTTGAAGGATTCAAGTCTCCTACCATGTATTGCTCCATGCCTTCTTCGTCGATGTTCGAGTTTGATGAATCCCCGTGCGCGAAAAAGGAAGCTAAAAGGATGCGTTTGGATACAAGCATGATGGATAAAACAGGGTCACATTTTCAAGCACCAGCTAGCCTTAACTTTGTATAA 480 0.4271 MESGERECYYRILGVSSDSSFQEIKRAYRKLAMQWHPDRWTKNPSLLGEAKRKFQQIQEAYSVLSDQKKRTMYDAGLYDPEEEEDEEKECGLEDLQSMFMEMLEGFKSPTMYCSMPSSSMFEFDESPCAKKEAKRMRLDTSMMDKTGSHFQAPASLNFV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01438 159 PANTHER PUTATIVE, EXPRESSED-RELATED 86 143 - -
Adu04g01438 159 PANTHER PUTATIVE, EXPRESSED-RELATED 4 87 - -
Adu04g01438 159 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 87 - -
Adu04g01438 159 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 86 143 - -
Adu04g01438 159 SMART dnaj_3 7 69 IPR001623 -
Adu04g01438 159 Pfam DnaJ domain 9 74 IPR001623 -
Adu04g01438 159 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Adu04g01438 159 PRINTS DnaJ domain signature 10 28 IPR001623 -
Adu04g01438 159 PRINTS DnaJ domain signature 28 43 IPR001623 -
Adu04g01438 159 PRINTS DnaJ domain signature 49 69 IPR001623 -
Adu04g01438 159 ProSiteProfiles dnaJ domain profile. 8 77 IPR001623 -
Adu04g01438 159 SUPERFAMILY Chaperone J-domain 6 84 IPR036869 -
Adu04g01438 159 Gene3D DnaJ domain 1 98 IPR036869 -
Adu04g01438 159 CDD DnaJ 8 66 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01438 Adu-Chr4 47577622 47579754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01438 5 75 C2H2 Transcription Factor Family AT1G74250 47.222 2.29e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01438 - - aip:107639293 291.197