Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01428 ATGAAGACCAGGCTGGAGGCGGCGACGTTCAGGCTGCAACAAGGGAAAGCGACGATTCTACTTCATCCCTCAGATGCGAGAAGACGACGATTTTGCGGTGAAACTGTCAGAGTGAGAGCCGGTGGCAGTGATTTAAACACTGTACATGAGCTCTCAGCCAACTCAACTATTAATTTGAAAAGGATGGGAATATATGATCCGTTCCATCAAGTTAGCATGTGGAGTGACAGCTTCAAAGTTGATGGCAGCCTGAATTCAGTTGCTTCCCCAATGTTAATGGTGAACACAAATATGGAGGAAAGTAAGCCTGAGTTTATTCCTCATGAATCAGGGGATCCTTCCGGAGATGATCAAGAGATTACTGATAAAGAAGTCCGTAAGGTGAATCGACGACTGGCACAAAATCGTGAGGCTGCACGGAAAAGCCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCAGATTGAAGCTCATGCAATTGGAGCTGGAGATAGAGAAAGCAAGAAAACATGGTCTATATGTAGGGAGTGCATTAGATGATGGTTATACTGGCTCACCGGGAACAATAACCTCAGCAGGGTTAACGGTGTTTGAGATTGAATATGGACACTGGGTTGAACAACAGCATCGGCAGAACGATGAACTCAGAAATGCATTGCACACTCATGCATCTGATATAGAGCTTCATCTACTTGTTGAGAGCAACTTGAATCATTATGCAAATCTTTTCCAGATGAAAGCAGATATGGCAAAGATTGATGTATTTTATTTGATCTCTGGTGCGTGGAAAGCATCGGTTGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCGCACCTTCTAAATATCATAGTGCCACAACTTGAGCCTTTGAGCGATCAACAAGTCGCCAGTATTAACAACCTCCGTCTATCGTCCCAGCAAGCAGAAGATGCGCTTTCACTGGGGTTGGAGAAACTACAGCAGGGTCTGGTCCACAGCATAGCAGTTGATCCAATGCTTATAGGAAACTATGGATTTCAGATGGCTGCCGCCCTTGACAATATTGAGGCTCTAGAAGGTTTTGTGAGCCAGGCAGATCACCTCAGGCAACAAACTCTGCTGCACATGTCTCGAATCTTGACGACCGGCCAAGCCGCTCGAGGTTTGATGATAATGGGAGAATACTTACAACGCCTTCGCACTCTTAGCTCTTTATGGTCATCTCGTCCTTGA 1227 0.4556 MKTRLEAATFRLQQGKATILLHPSDARRRRFCGETVRVRAGGSDLNTVHELSANSTINLKRMGIYDPFHQVSMWSDSFKVDGSLNSVASPMLMVNTNMEESKPEFIPHESGDPSGDDQEITDKEVRKVNRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIEKARKHGLYVGSALDDGYTGSPGTITSAGLTVFEIEYGHWVEQQHRQNDELRNALHTHASDIELHLLVESNLNHYANLFQMKADMAKIDVFYLISGAWKASVERLFLWIGGSRPSHLLNIIVPQLEPLSDQQVASINNLRLSSQQAEDALSLGLEKLQQGLVHSIAVDPMLIGNYGFQMAAALDNIEALEGFVSQADHLRQQTLLHMSRILTTGQAARGLMIMGEYLQRLRTLSSLWSSRP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01428 408 SUPERFAMILY Leucine zipper domain 127 161 IPR046347 GO:0003700|GO:0006355
Adu04g01428 408 Gene3D - 126 174 - -
Adu04g01428 408 PANTHER FACTOR TGA7, PUTATIVE-RELATED 62 407 - -
Adu04g01428 408 PANTHER TRANSCRIPTION FACTOR TGA9 62 407 - -
Adu04g01428 408 Coils Coil 146 173 - -
Adu04g01428 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 130 145 IPR004827 GO:0003700|GO:0006355
Adu04g01428 408 Pfam bZIP transcription factor 126 156 IPR004827 GO:0003700|GO:0006355
Adu04g01428 408 Pfam Seed dormancy control 216 289 IPR025422 GO:0006351|GO:0043565
Adu04g01428 408 SMART brlzneu 122 183 IPR004827 GO:0003700|GO:0006355
Adu04g01428 408 ProSiteProfiles DOG1 domain profile. 197 407 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01428 Adu-Chr4 43864090 43872782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01428 58 408 Calmodulin-binding Proteins AT1G77920 54.121 2.28e-131 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu04g01428 DOG1 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01428 K14431 - gmx:100775882 499.204