Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01404 ATGAGCACGAGCTACTTCATTCTTCTCTCTGTGGCTGCTTCTTCCGCTGCTGCAGCTGCCGCCGTTGCGTCGCACGAGATCCCTCCACTGCCGCTCTCATCGCATCTACTCCCATCATGGCAGAGCTCTCTCTGCCGCTGCTCTCATCGCATCTGCTCCCTCTGGCTCCTCTTTCATCTAATTCCAACTCGCTCTCTTAGTTCTTCTCGTAACCATCTCAAATTTCAGGTCCCTGAAGAACATAGTACTAAATTTGATGGATCTTCTATTTTGAAGGAGACTGACATTGGGAGGCATGTGAATCGGTTGCGAAAGCATTCCTCCAATGGCATTCGTAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAACCGGGTGGAACAGCTTCTCTCATGGGTAAAACCAAACCTCAACTCAAATGTTTTGGGACATTTTTCTTAGCGCCCCTTGAGTTGCCTTTTCCTCAAAAGAACGAGCAGCAAAGCATATCTTTTGACAGAGACAGACGCTTTCACCTGAAGTATCAGCAAAGGAGGAGTATGCAAAAGAATTTTACAGGTACCATGGATGTGGATTCAAGTTATCAGAGTGGTAATGAATCTGGAAAGTATGTGCCTTTTGATGTTGAAGACAACCCGAAAAGGGGGATTCCTTGTTTATGCTTTGGTCTTCAGAAGCATTGCTACCTGCTTAGCGTATTTATATTCTTTTAA 744 0.4556 MSTSYFILLSVAASSAAAAAAVASHEIPPLPLSSHLLPSWQSSLCRCSHRICSLWLLFHLIPTRSLSSSRNHLKFQVPEEHSTKFDGSSILKETDIGRHVNRLRKHSSNGIRRLVKLLVRKWKEIVDEWVRLNQPGGTASLMGKTKPQLKCFGTFFLAPLELPFPQKNEQQSISFDRDRRFHLKYQQRRSMQKNFTGTMDVDSSYQSGNESGKYVPFDVEDNPKRGIPCLCFGLQKHCYLLSVFIFF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01404 247 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 89 135 IPR035441 -
Adu04g01404 247 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 88 136 IPR035441 -
Adu04g01404 247 ProSiteProfiles TFIIS N-terminal domain profile. 1 129 IPR017923 -
Adu04g01404 247 Pfam TFIIS helical bundle-like domain 90 126 IPR017923 -
Adu04g01404 247 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 91 141 IPR044790 -
Adu04g01404 247 CDD TFIIS_I 90 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01404 Adu-Chr4 39253893 39256296 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu04g01404 Med26 4.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01404 - - adu:110280706 170.244