Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01402 ATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACTGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGCCGTGCTCCTGCAACAATATATTTTAGAAGTTGTATTGGACTGGAAGAGAGGGAAGGGGAGTGATTGTGAATACAGAAGTTTGGACCTCTTCATATATGGGAACAATGCTGATCGATTCCTGCATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGAAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTCGCCAAAAGGGCTGTTTTCGCCGGAGCCAGAACATTACCAAAGCTAAAAGTTGCCATCATTGGAGCTGGGCTTTCTGGCATGTCAACTACAGTGAAACTCTTGGATCAAGGACACGAGGCAGAAAAGCTGACGCTGAGCTCTCGAGCCTTTTACAATGATCGGTTTCCACCATTTGCTGAGCATTTGACAAGTATGCTTGGTTATGATATGGTTCTTCCCATGAACAATGGTGCTGAAGGAGTGGAAATAGCTCTGAAATTAGCAAGAAAGTGGGAAGCCCTTGAAAGAATTTTTAAAGAAAAAGGAGAACACATAGCTGGCTTTCTTTTGGAACCCATCCAGGGTGAAGCTGGGGTAATCATTCCTCCGGATGGCTATTTGAAAGCTGTTAGAGATCTTTGCACTAGATATAATGTGCTGATGATTGCAGACGAAATACAAACTGGGTTAGCAAGAACAGGGAAGATGCTGGCTTGTGACTGGGAAGAAGTTCGCCCAGATGTTGTGGAGAGCATGGAAGTACCTTTGGCGGGAATCCATTGGCCAGTGCTGAACTTCTTAAATCCCTATGATTATAAAGTTTTACCTAAAGGAGCTAAAGCTACTGTCTCTCTATGGTTCAGTTGCATTTGA 1053 0.4558 MRRKRGGCSAVHCRRSWGRLKPPPQLGLAVLLQQYILEVVLDWKRGKGSDCEYRSLDLFIYGNNADRFLHWSTRFQIVLGVERGLQYLHEDSHLRIVHRDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFAGTFAKRAVFAGARTLPKLKVAIIGAGLSGMSTTVKLLDQGHEAEKLTLSSRAFYNDRFPPFAEHLTSMLGYDMVLPMNNGAEGVEIALKLARKWEALERIFKEKGEHIAGFLLEPIQGEAGVIIPPDGYLKAVRDLCTRYNVLMIADEIQTGLARTGKMLACDWEEVRPDVVESMEVPLAGIHWPVLNFLNPYDYKVLPKGAKATVSLWFSCI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01402 350 Pfam Protein kinase domain 76 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01402 350 SUPERFAMILY Protein kinase-like (PK-like) 51 140 IPR011009 -
Adu04g01402 350 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01402 350 Gene3D Transferase(Phosphotransferase) domain 1 53 150 - -
Adu04g01402 350 SUPERFAMILY PLP-dependent transferases 181 309 IPR015424 -
Adu04g01402 350 PANTHER AMINOTRANSFERASE CLASS III 179 235 - -
Adu04g01402 350 PANTHER AMINOTRANSFERASE CLASS III 234 309 - -
Adu04g01402 350 Pfam Aminotransferase class-III 232 309 IPR005814 GO:0008483|GO:0030170
Adu04g01402 350 Gene3D - 232 311 IPR015421 GO:0003824
Adu04g01402 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Adu04g01402 350 Gene3D - 176 231 IPR015421 GO:0003824
Adu04g01402 350 PANTHER ORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL 179 235 IPR010164 GO:0004587
Adu04g01402 350 PANTHER ORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL 234 309 IPR010164 GO:0004587
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01402 Adu-Chr4 38679318 38682852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01402 69 140 Receptor kinase-like Gene Family AT1G70530 61.111 6.38e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu04g01402 Aminotran_3 3.8e-29 CL0061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01402 - - aip:107647562 237.269