Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu04g01400 | ATGATCCCTGAAAGAAGTTACTACAGATGTACAAATGTGAAGTGTAATGTTCGAAAGCACGTGGAGAGAGCAATAGATGATCCAAGAGCATTTGTCACTACATATGAGGGAAAGCACAATCACGAGATGCCAATCAAGAACATCAACCCAAATGTCCCCTCTGAGAGAGATTCACAAGCTTCTCTTAGTAAAGACAAACCATGA | 204 | 0.4069 | MIPERSYYRCTNVKCNVRKHVERAIDDPRAFVTTYEGKHNHEMPIKNINPNVPSERDSQASLSKDKP | 67 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu04g01400 | 67 | Pfam | WRKY DNA -binding domain | 4 | 42 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu04g01400 | 67 | Gene3D | WRKY domain | 3 | 45 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu04g01400 | 67 | MobiDBLite | consensus disorder prediction | 41 | 67 | - | - | |
Adu04g01400 | 67 | SMART | WRKY_cls | 5 | 43 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu04g01400 | 67 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 5 | 53 | IPR044810 | GO:0003700 | |
Adu04g01400 | 67 | ProSiteProfiles | WRKY domain profile. | 5 | 44 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu04g01400 | 67 | PANTHER | OS12G0507300 PROTEIN | 5 | 53 | - | - | |
Adu04g01400 | 67 | SUPERFAMILY | WRKY DNA-binding domain | 4 | 44 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu04g01400 | Adu-Chr4 | 38078498 | 38078862 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu04g01400 | 5 | 45 | WRKY Transcription Factor Family | AT2G37260 | 73.171 | 4.40e-18 | 73.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Adu04g01400 | WRKY | 1e-13 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu04g01400 | - | - | gmx:100794069 | 114.775 |