Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01397 ATGGACGTGCAGTACCCGCCAGTTGTGGCACCACCTCATAAGAGCAGCCTACAGAAGTTGAAGGTCAAATTGAAGGAAACTTTGTTCCCTGATGATCCAATGAGACAATTCAAGGGTCAACCATTTGGTACAAAAATAGTCCTTGCTGCTCATTATGTGTTCCCTATTCTTCAATGGCTCCCTCAATATAGCCTCAAACTCTTTAAATCTGACATTATTTCTGGTATCACCATTGCTAGCCTTTCAATCCCTCAGGGGATTAGTTATGCTAAGCTTGCAAGTTTACCTCCAAGTTTTGGACTTTATTCTAGTTTTGTTCCCCCACTTGTGTATGCTGTTCTTGGAAGCTCAAAGGACCTTGCAATTGGTCCAGCAGCTATTACTTCTCTTGTGTTAAGATCCATGCTTACGCAACGAGTGTCTCCCACATCACAACCTCATCTCTATCTTCAGCTTGCTTTTACTTCCACTCTTGTTACTGGTGTCTTTCAGGCAGCTCTTGGTATTCTAAGGCTTGGATTTATCATTGACTTTCTATCAAAGGCCATACTTGTCGGATTCATGGCTGGAGTTGCTGTAATTGTATCTCTGCAGCAGCTTAAGAGTCTTCTTGGAATCACAAATTTCACCAAAAAGATGACCATCGTTGATGTATTGAGTTCTGTTTTTAGCAATATTCACGAGAGCTTAAAGAAGCCAAAATATTTCTGGGTCTCAGCTGGAGCTCCTCTTCTGTCAGTAATAATCGCAACTGCCATACTTTTTGCAATTAGGGGTAAACATCCTGCCATTGTTGTTATTGGAAAGCTTCCAGAAGGAGTAAATCCTCCTTCAGTAAAGATGTTGTATTTCGAAGCAACTCATTTAGGACTGGTCATTAAAACTGGGATCATTGTTGGTATTTTATCCCTCACTGAATCTATTGCAGTTGGAAGAACATTTGCAGCTATAAGAAAATACAAAGTGGATGGTAATAAGGAAATGATAGCTATTGGGTTGATGAATGTAATAGGATCCACCACATCATGTTTTGTTACAACAGGATCATTCTCTAGGACGGCTGTGAACCACAACGCAGGGGCAAAAACAGCGATGTCGAACGTAGTTATGTCGGTGGCAGTGTTGGTGACACTCTTGTTTCTGATGCCATTATTGCATTACACACCGCATGTGGTGTTGGGTGCAATCATAGTAACAGCAGTCATTGGCTTTGTTGATATACCTGCTGCTTACCGTATTTGGAAGATTGACAAATTCGATTTCGTTGTCATGTTGACTGCATTCTTCGGTGTCATTTTTATCTCAGTTGAGTATGGCCTAGCTCTTGCTGTTGGTTTATCAATCTTAAGGATCCTATTGCAAATTACAAGACCAAAAACAGTAATGTTGGGGAACATACCAGGGACAAGATTGTATCGAGATCTTCACCATTATAACCAAGCTACAAGAATTCCTGGTTTTCTCATTTTAAGCATAGAAGCTCCCATCAACTTTGCCAACATCACCTATCTCCAACAAAGGACTTTGCGATGGATTGAAGAAGAAGAAGAAAGCATGAAGGATAACTCAGTTTTTCAGTTTGTGATATTGGAGATGTCAGGTAGTACATTATTATT 1616 0.4041 MDVQYPPVVAPPHKSSLQKLKVKLKETLFPDDPMRQFKGQPFGTKIVLAAHYVFPILQWLPQYSLKLFKSDIISGITIASLSIPQGISYAKLASLPPSFGLYSSFVPPLVYAVLGSSKDLAIGPAAITSLVLRSMLTQRVSPTSQPHLYLQLAFTSTLVTGVFQAALGILRLGFIIDFLSKAILVGFMAGVAVIVSLQQLKSLLGITNFTKKMTIVDVLSSVFSNIHESLKKPKYFWVSAGAPLLSVIIATAILFAIRGKHPAIVVIGKLPEGVNPPSVKMLYFEATHLGLVIKTGIIVGILSLTESIAVGRTFAAIRKYKVDGNKEMIAIGLMNVIGSTTSCFVTTGSFSRTAVNHNAGAKTAMSNVVMSVAVLVTLLFLMPLLHYTPHVVLGAIIVTAVIGFVDIPAAYRIWKIDKFDFVVMLTAFFGVIFISVEYGLALAVGLSILRILLQITRPKTVMLGNIPGTRLYRDLHHYNQATRIPGFLILSIEAPINFANITYLQQRTLRWIEEEEESMKDNSVFQFVILEMSGSTLL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01397 538 Pfam STAS domain 478 535 IPR002645 -
Adu04g01397 538 Pfam Sulfate permease family 232 426 IPR011547 GO:0016021
Adu04g01397 538 Pfam Sulfate permease family 68 228 IPR011547 GO:0016021
Adu04g01397 538 PANTHER BNAA09G30120D PROTEIN 227 534 IPR030313 -
Adu04g01397 538 PANTHER BNAA09G30120D PROTEIN 8 226 IPR030313 -
Adu04g01397 538 PANTHER SULFATE TRANSPORTER 227 534 IPR001902 GO:0015301|GO:0016020|GO:0055085
Adu04g01397 538 PANTHER SULFATE TRANSPORTER 8 226 IPR001902 GO:0015301|GO:0016020|GO:0055085
Adu04g01397 538 TIGRFAM sulP: sulfate permease 55 533 IPR001902 GO:0015301|GO:0016020|GO:0055085
Adu04g01397 538 Gene3D STAS domain 457 537 IPR036513 -
Adu04g01397 538 ProSiteProfiles STAS domain profile. 477 538 IPR002645 -
Adu04g01397 538 ProSitePatterns SLC26A transporters signature. 97 118 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01397 Adu-Chr4 37307813 37314592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01397 3 533 Inorganic Solute Cotransporters AT3G15990 60.360 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01397 K17471 - gmx:100779433 772.696