Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01388 ATGTCTTCTCATTCGTTCAGTAACCTCTTCCACTCTTCCACAACCACCACTACTCCAAACTCCTCAACAACTACCCTTCTTGATTCCATTGTTGCAACCCCAAAACATCAACTCACTGCTTGTATTTGCACCCATTGTAACCATCTCCTCACTTTCAATCCTGCAGGTCATGGTGTGGAGCAAGGGACAAATAATAATAATAATAATAATAATGTGCAATCTCATCATCATCAACTTCAACAAGGAACAAGGTGGAGTCCAACGCCAATTCAGTTATTGGTGCTTGAGGAGTTGTATAGGCAAGGAACCAAGACTCCGTCGGCCGAGCAAATCCAGCAGATAGCTTCTCAGCTGCGACGCTTCGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTTCAGAATCACAAGGCCAGGGAGCGCCAGAAGCGTCGCCGCCGCGAGATGGAGGAAACTACTGCTGCTGCTTCTGCCAAAGGGTTGAAAGAGACAGGTTGTGAAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAATGGTGGTGGTGGACATGCAGTTCAGGAATCTATGAGTGCAGTTGATATATCAGAAAAGGAGTCAAATGGTTGGAATGAATTTGAAGAGAGAGTTTTGAGGAGAAACAGATCTGAGAGACAGGCTAAGTACTTTAACATTCCCTCCATTAACATTGCAGCAACTGCTTCCGTAGCTTCACAGATAACTCATAACATTCAACTTCTAAGTACTCATCATCATCCTCAACATCACAACTACAATAATAAACAAGACAATAATTCGTCTCATCCTCGAACCCTTGAGCTTTTCCCAATTCACAAGAACCATGATGATGATGATGACATCATTTCTTTCTCGGACAGGAATTCCAACAAGCTATGTGCCAATGCGTCCATGGAAGAAGCCCTTAGCTGTGACCAGTTTTTTGAGTTTCTTCCATTAAGGAACTGA 972 0.4352 MSSHSFSNLFHSSTTTTTPNSSTTTLLDSIVATPKHQLTACICTHCNHLLTFNPAGHGVEQGTNNNNNNNNVQSHHHQLQQGTRWSPTPIQLLVLEELYRQGTKTPSAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEETTAAASAKGLKETGCEVKETKKWASTSNCNGGGGHAVQESMSAVDISEKESNGWNEFEERVLRRNRSERQAKYFNIPSINIAATASVASQITHNIQLLSTHHHPQHHNYNNKQDNNSSHPRTLELFPIHKNHDDDDDIISFSDRNSNKLCANASMEEALSCDQFFEFLPLRN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01388 323 MobiDBLite consensus disorder prediction 251 272 - -
Adu04g01388 323 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 323 IPR044555 GO:0003700|GO:0099402
Adu04g01388 323 ProSiteProfiles 'Homeobox' domain profile. 78 143 IPR001356 GO:0003677
Adu04g01388 323 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 323 - -
Adu04g01388 323 CDD homeodomain 83 138 IPR001356 GO:0003677
Adu04g01388 323 Pfam Homeodomain 83 142 IPR001356 GO:0003677
Adu04g01388 323 Gene3D - 82 149 - -
Adu04g01388 323 MobiDBLite consensus disorder prediction 60 83 - -
Adu04g01388 323 SUPERFAMILY Homeodomain-like 78 145 IPR009057 -
Adu04g01388 323 SMART HOX_1 80 147 IPR001356 GO:0003677
Adu04g01388 323 MobiDBLite consensus disorder prediction 1 23 - -
Adu04g01388 323 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01388 Adu-Chr4 36585480 36588350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01388 71 181 Wox Gene Family AT3G18010 54.098 1.95e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu04g01388 Homeodomain 5.9e-19 CL0123