Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01346 ATGGCTTACCGGACACTGCCATCTATGGCTGCTTCATCGTCATCTTCGTCTTCCAAAAAACATGATGTTTTTATCAGTTTTAGAGGCGAGGACACACGCAACAACTTCACAAGCCATCTTTGTGCTGCTCTTAACCAAAGCAAGATACAAGTCTTCATAGACAACAGAATTTCCAAGGGAGATGAGAACTCTTCCTCAATCTTCAAAGCCATAAGGGATTCCAATGTGTCCGTGGTTGTTCTGTCAAAGGACTACGCTTCCTCGACGTGGTGCATGCGTGAACTCACAAAAATACTCGAGCAAAAGAGACATGGTAAGGGCCACATTGTGGTACCTGTGTTCTATAAGATTGACCCTTCACATGTTAGGAAGCAAATTGGCACTTACAAGAAAGCATTTGAGAAACATGAGAGAGATGTCAAACACAACATTCTGCTGAAATGGAAAGCTGCTCTCACTGAAGTAGCCAATTTAGTTGGGTGGGATTCACAGAATTACAGGATCGAATCTGAACTCGTTGAGGAAGTTGTCAAAGATGTTATGCAAAAACTGAATTGCATATATCCCCCTGAAGTGAAAGATCTTGTTGGAATTGACCAAAATCTTGCTCCCATTAAATCCTTGTTGAGAATCAGGTTAAGAGAAGTTCGAATAATAGGAATTTGGGGCATGGGCGGAATAGGTAAAACAACCATTGCCAAAGCCTTGTTTTCCAAACTATCTTCTCAATATGAAGGTAGCTGCTTCTTGGAGAATGTAAGGGAAGAATCAGAACAGCATTTGCTGAATAAACTTCTTTCTGAGGTACTAGAGGATGCAAATCACTATTTCGGCACACCTATAGCAAGATCCACCTTTGTTATGAGGAGGCTTAGCCGAaaaaaggtgttaatagtgcttgatgatgttgacaatctgaagaagctcgaagatcttgctgcaaaacataatttcttgggaccaggcagtagagtcattgtcacgactagagataagcatgtccttagcaaaggggtcgatgaaatatacgaggtcaaaggattgccccttcatcatgctattcagctttttagcttaaatgcctttgacaaaagctatcctgaatcaggttttgtgatgctatctaaaatggtggttgattatgcaaatggcaatccattggctttaaaagttttaggctcattccttcattctagaaatctgcaacaatggaacagtgctctgagaaaactcacaaaatttccaaatacagagattcagaatgtgttgaggtggagttatgatggattagatgatgatgaacagaagaatatgtttctggacattgcatgctttttccaaggagagaagaaagaaactgttacacggctacttgatatttgtggtttctatgcagatattgggatAAGAATCCTGCAGGACAAAGCTCTAATAACATTTTCAGATGCAAATGAATTACACATGCATGATTTGATACAAGAAATGGGTTTGGAAATTGTTCGTCAGGAATCAACCAAAGACCCTGGAAGGCGCAGCCGGTTGTGGGATCCCGAGGAAATCTATGATTTACTGAAAAATGATAGGGGAAGTGATGCAGTTGAAGGCATAATGTTAGATGTGTCTCAAATAAGAGTCTTGAACTTGAGCTATGAGAGCTTCTCAAGGATGACCAGTCTAAGATTCATCAAATTCTATATGGGTAGGGGTAGGACATGCAATCTGTTCCTTCTTTCAGGTCTTGAATCATTGTCTAGTAAATTGAGGTACCTCCAATGGGATGGATACCCTTCCAAGTCTTTGCCATCGACCTTTTCTCCAGACAACCTTGTTGTGCTTTCCATGATGGGAAGCCATGTTGAAAAACTATGGGATGGAGTTAAGAGTCTTCCAAGCTTGAAAGAGATCAACCTTCGCGCCTGCAGCAATTTAACCAATCTCCCCGACTTATCTCTAGCGCCAAATCTTGAAAGGGTAGATCTTTCTCTTTGTACAAGTCTGCTTTGTGTTCCCACATCTATCAAGTATACCAACAAACTTCTTTTGTTTAACCTGGAATCCTGCAAAAATCTGAAGAGTCTTCCAAGAAACATTCACTTATTTTCTCTTCAAATGTTCATTCTCAAAGGCTGCTCAAGTCTTGATGAGTTTTCATTGACTTCAGAGAACATGACACGCCTGGACTTAAGAGGGACGGATATTGAACATTTTCCAGAATCACTTTGGCAACTTCTTAACCAGCTGGTTTACTTGAATCTGGAATCCTGTGCTAAGCTTAAGAGTCTCACAAGCAACATTCACTTGGTATCTCTACAAAGGCTCAATCTTAGAGATTGTTCAAGCCTTGAAGTTTTCTCTGTGACTTCAGAGAACATGGAATACCTGAATTTGGGAGGAACATCAATCAAAGGATTGCCAACATCAATTTGGCGAAACAATAAGCTTTTTACTTTGGTTCTTCATTCCTGTAAAAGACTTGTGAATTTTCCAGACAAGCCGAAACTTGGTGAATTGTCTCTTACTTTCAATGAGAAAAACTCTTTTGAAGGTCCAACTGTGGATGAACCATGGAATTTGTCATCCTTATCAGATTTATCACTGAAAGGAAGCGGTATTGTGAACTTACCTGCAAGCATCAAAGATCTTCCAAGACTGAAAAAACTTACCTTGATGGATTGCAAGAAGCTTTGGTCTCTACCAAGCCTTCCATCATCTTTGGAAGACTTATCCCTTGATGAAAGAAATATTGATTTTTTACCTGTAAATATCAAAGATCTTTCTCATTTGAAAAAGCTTACCATAATTAACAAGAAGAGGCAGTTTTCTCCACCGGAGCTTCCACCATCCTTGAAAGATATATTCCTAAATGAAAGTAAAGTTGATTCCTTGCTTCTGAGCATGAAAGATCTTTCTCATCCACAAAAGTTTCCTCTGATAAAGTGTAACTGGCTTCATCCTCTACTTGAGTTTCCGCCATGTTTGGAAGATTTATCAATAAATGAAAGCAATATTGAGTGCCTGCCAGTTAGCATAAAAGATCTTTCTCACCTGAGAAAACTATCCTTAATAGAGTGCCAGAGGCTTCGGTACTTGCCAGAGCTTCCCCGATCTTTAGAACATCTGTCTGTAAATGGCTGTAACATTGAGAGCTTGCCAAGGAACATCAAAGATCTTTCTCATTTGCAAACCATTACCTTAGTCGATTGCAAGAGGCTCCGGTCTGTACCAGAACTTCCACCATGCCTGCAATCTTTTTGTGCAGCAGATTGCAGATCACTTGAGATTGTTCCAAGTTCAAAGACTATCTTGATGGAAGAGAGGATTGCCTTTTATTACAATTGCATAAACTTGGATCAGAATTCGCGCAACAACATCATTGCAGATGCCCCCTTCGAGGCAGCTTTTGCTTCCTTGAAAGAAAGAACACCTCTTGGTCCTTTGATATCCATATGTCTGCCAGGAATTGAAATCCCAGACTGGTTCAGCTACCAAACACCGAATTCTGCATTGAACATAGAAATTCCTCAACGGTGGTTCATTGATTCGAAGTTCTTAGGCTTTGCTCTATGCCTTGTAATTGGTGGTTCTCATCAAAACAGCAACGAAGGCTATGATCCAGATATTAATTGTTATCACTTTGTAAAGCCTGCTGGCAACTATGATCCCAATGATCGCTTTCTTGGACATTGCACAACTATAATGCAGGTGCCGTGGGGTTTCAATTCAGATCATATATTCATATGCTACTATCCAGCTTTCAATGTTCCCATCATGCAAGATTTCAAGGACTTAGCCAAGTACTATGATGCAAACAGCCTGAATCTCAGAGTCATTTTTAAATTTAAGGGTCCATCTCAAAGGTTGGACCTTGTGAAGAAGTGTGGAGTCAGACCACTATTGATTGCTAATACTAAAAGGTTTCACATTGAGACTTGA 3933 0.3491 MAYRTLPSMAASSSSSSSKKHDVFISFRGEDTRNNFTSHLCAALNQSKIQVFIDNRISKGDENSSSIFKAIRDSNVSVVVLSKDYASSTWCMRELTKILEQKRHGKGHIVVPVFYKIDPSHVRKQIGTYKKAFEKHERDVKHNILLKWKAALTEVANLVGWDSQNYRIESELVEEVVKDVMQKLNCIYPPEVKDLVGIDQNLAPIKSLLRIRLREVRIIGIWGMGGIGKTTIAKALFSKLSSQYEGSCFLENVREESEQHLLNKLLSEVLEDANHYFGTPIARSTFVMRRLSRKKVLIVLDDVDNLKKLEDLAAKHNFLGPGSRVIVTTRDKHVLSKGVDEIYEVKGLPLHHAIQLFSLNAFDKSYPESGFVMLSKMVVDYANGNPLALKVLGSFLHSRNLQQWNSALRKLTKFPNTEIQNVLRWSYDGLDDDEQKNMFLDIACFFQGEKKETVTRLLDICGFYADIGIRILQDKALITFSDANELHMHDLIQEMGLEIVRQESTKDPGRRSRLWDPEEIYDLLKNDRGSDAVEGIMLDVSQIRVLNLSYESFSRMTSLRFIKFYMGRGRTCNLFLLSGLESLSSKLRYLQWDGYPSKSLPSTFSPDNLVVLSMMGSHVEKLWDGVKSLPSLKEINLRACSNLTNLPDLSLAPNLERVDLSLCTSLLCVPTSIKYTNKLLLFNLESCKNLKSLPRNIHLFSLQMFILKGCSSLDEFSLTSENMTRLDLRGTDIEHFPESLWQLLNQLVYLNLESCAKLKSLTSNIHLVSLQRLNLRDCSSLEVFSVTSENMEYLNLGGTSIKGLPTSIWRNNKLFTLVLHSCKRLVNFPDKPKLGELSLTFNEKNSFEGPTVDEPWNLSSLSDLSLKGSGIVNLPASIKDLPRLKKLTLMDCKKLWSLPSLPSSLEDLSLDERNIDFLPVNIKDLSHLKKLTIINKKRQFSPPELPPSLKDIFLNESKVDSLLLSMKDLSHPQKFPLIKCNWLHPLLEFPPCLEDLSINESNIECLPVSIKDLSHLRKLSLIECQRLRYLPELPRSLEHLSVNGCNIESLPRNIKDLSHLQTITLVDCKRLRSVPELPPCLQSFCAADCRSLEIVPSSKTILMEERIAFYYNCINLDQNSRNNIIADAPFEAAFASLKERTPLGPLISICLPGIEIPDWFSYQTPNSALNIEIPQRWFIDSKFLGFALCLVIGGSHQNSNEGYDPDINCYHFVKPAGNYDPNDRFLGHCTTIMQVPWGFNSDHIFICYYPAFNVPIMQDFKDLAKYYDANSLNLRVIFKFKGPSQRLDLVKKCGVRPLLIANTKRFHIET 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01346 1310 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 742 - -
Adu04g01346 1310 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 743 924 - -
Adu04g01346 1310 PRINTS Disease resistance protein signature 218 233 - -
Adu04g01346 1310 PRINTS Disease resistance protein signature 290 304 - -
Adu04g01346 1310 PRINTS Disease resistance protein signature 382 396 - -
Adu04g01346 1310 PRINTS Disease resistance protein signature 627 643 - -
Adu04g01346 1310 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Adu04g01346 1310 Pfam TIR domain 20 189 IPR000157 GO:0007165
Adu04g01346 1310 Gene3D - 184 344 IPR027417 -
Adu04g01346 1310 Gene3D Ribonuclease Inhibitor 700 830 IPR032675 -
Adu04g01346 1310 Gene3D Ribonuclease Inhibitor 532 699 IPR032675 -
Adu04g01346 1310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 742 IPR044974 GO:0006952
Adu04g01346 1310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 743 924 IPR044974 GO:0006952
Adu04g01346 1310 SUPERFAMILY L domain-like 790 1076 - -
Adu04g01346 1310 Gene3D Ribonuclease Inhibitor 833 945 IPR032675 -
Adu04g01346 1310 Pfam NB-ARC domain 214 420 IPR002182 GO:0043531
Adu04g01346 1310 SUPERFAMILY L domain-like 489 825 - -
Adu04g01346 1310 SMART till_3 20 158 IPR000157 GO:0007165
Adu04g01346 1310 Pfam C-JID domain 1151 1296 IPR045344 -
Adu04g01346 1310 ProSiteProfiles TIR domain profile. 19 184 IPR000157 GO:0007165
Adu04g01346 1310 Gene3D Ribonuclease Inhibitor 957 1103 IPR032675 -
Adu04g01346 1310 Pfam Leucine Rich Repeat 608 627 IPR011713 -
Adu04g01346 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Adu04g01346 1310 Gene3D - 17 183 IPR035897 -
Adu04g01346 1310 Gene3D - 348 431 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01346 Adu-Chr4 34722371 34726569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01346 16 808 WRKY Transcription Factor Family AT4G12020 37.454 3.78e-126 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01346 - - ahf:112742518 2196.01