Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01322 atgGCACAAATAGAATGGGCCATTTTAAATAGGTCTGACATTTTGCATCATTACCCGACCCCGATTCTGACCAACTCCTCCAACCCGACCCAGCTCGACTCTCCGCCGGCGGTGAAACTCGTTCCTCCAGTATTGGCCATCGCTCCTTTGTCTCTTCCTGTTGCTCGCAGCAAGCCCCGCCTCAAACTCCTCTTTCAGTTAATTGGTGTTTTTGAGGAGGAAAATGTCTTCACTTGCAGGATGTGTCGCAGGCCTACACCACCGCCGCAAGGAGTGGCATATTGCCGCCGTCCGTTAAGTTCGCCATCCGTCCGTCCGTCCGTCCAAGTCTTCAACCCCTGTTCGCTGTCACCGATCGCAGCTGCTTCCTCGAGCTTTGGCGTCCGTCGTCTTTGTCTGCTCAGCCGCGCTTCCGCCGCCGTTTGTTTGCCGTTCACGTTCTCCTCTTCGTTCAGCCGTCGTCTACCTTCGCGTTCTTCGCCGTTCACGTTCGCTCGGCGTTCACCGTTCGCGTTCACTCGCTGTTCACCGTTCGAGTTAGCATTCGCGTTCGTCTGGAAGCCACGTTGCACTGCTTCAAACTCTGCGCCGAACTGCATTCGCGTTCGTCGAACTGCTCTCTTTTGTCGCCGCCACATGGAAGACAGCAGCAGCAATGGTGGTAGCGGGAAACGTGAGGAAATTGTGGACGTTGGGTCGGTCGTTGAAGCTGTTACTGCAGAGGAAGGTGATGCTCCCCTCTACAACGTTGAGAGCCTCTGCATGCGTTGCGGTGAAAATGGGATTACAAGATTCTTACTCACCTTAATTCCTCACTTCAGAAAGATTTTGTTGTCAGCTTTTGAGTGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGAGAAATTCAACCGCGTGGTTGCTCTTACACTCTGCAGATCCCATCTGACAATCCAAAGATGCTTGACAGACAAGTGGTAAAATCAGAATCTGCTACAATTAAGATTCCAGAATTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTTTCAACGGTGGAAGGCATACTAATGCGAGCTGCTGATGAGCTTCAGGCCCTTCAAGAGGAGCGCAGGAAAGTGTCTCCAGAGACAGCTGAAGCCATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCTACTGGAGAGTCAGCTTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTTGTTGAAAATCCGTTTGCGCCATCATCTGATCCATCATTGACTATCAAGTTTTATGACCGAACACCTGAGCAACAAGCATTGTTGGGATATCTTGTTGATTCTACACAGATTGAAGGAACTCGCAACGAAGCACAAGCAGGGGGAAATGCTGTGGTTACTGATCAAGTGAGGGGAGAGCCACATGGATCTGTGGGGGCAACTGCTGGTCATCGAGCCATTGCACAGAGTAATAGTTCAGAAATTGCGGAAGCCTTATTTCGATACACTGCACCGGAAGAGGTGATGACTTTCCCTTCAACTTGTGGTGCATGTGCCACTAAGTGTGAGACTAGAATGTTTGTCACCAATATTCCATACTTTCAAGAAGTAATCGTAATGGCATCCACATGTGACTCTTGTGGCTACCGCAACTCCGAGTTAAAACCAGGTGGACGAATTTCTGAAAAAGGCAAAAGAATTTCACTTCATGTGAAAAATGTTAACGACTTAAATCGCGATGTAATCAAGTCTGATACTGCAAGTGTAAAAATTCCTGAACTTGAATTGGAATTGGCAAGTGGCACCCTTGGGGGTTTGGTTTCAACTGTTGAAGGTTTGATTACAAAAATTAACGAAAGCCTTCAGAGGGTCCATGGATTTACTTTCGGTGATAGTTTGGATATTCCTATCCTTGAAGGACTTTTACCTAATGGCATCTTTTTGTTTATATTTTTGTGTGTGCAGCTTCTTAGCTTGGAAAAACCTTGGACTTTAATTCTTGATGATGCATTAGCCAATTCCTTTATAGCACCTGCAACTGATGATTTAAAAGACGACAATCAATTAACGTTTGAGGAGTATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGCTTGAATGATATGGATACTTCTGCTGCCGATGTTGCTTACGAATCAGCAAATAATACTAAAGTTGAATGA 2169 0.467 MAQIEWAILNRSDILHHYPTPILTNSSNPTQLDSPPAVKLVPPVLAIAPLSLPVARSKPRLKLLFQLIGVFEEENVFTCRMCRRPTPPPQGVAYCRRPLSSPSVRPSVQVFNPCSLSPIAAASSSFGVRRLCLLSRASAAVCLPFTFSSSFSRRLPSRSSPFTFARRSPFAFTRCSPFELAFAFVWKPRCTASNSAPNCIRVRRTALFCRRHMEDSSSNGGSGKREEIVDVGSVVEAVTAEEGDAPLYNVESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCSYTLQIPSDNPKMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERRKVSPETAEAIDQFLVKLRACATGESAFTFILDDPAGNSFVENPFAPSSDPSLTIKFYDRTPEQQALLGYLVDSTQIEGTRNEAQAGGNAVVTDQVRGEPHGSVGATAGHRAIAQSNSSEIAEALFRYTAPEEVMTFPSTCGACATKCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRISEKGKRISLHVKNVNDLNRDVIKSDTASVKIPELELELASGTLGGLVSTVEGLITKINESLQRVHGFTFGDSLDIPILEGLLPNGIFLFIFLCVQLLSLEKPWTLILDDALANSFIAPATDDLKDDNQLTFEEYERSWEQNEELGLNDMDTSAADVAYESANNTKVE 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01322 722 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 226 718 - -
Adu04g01322 722 SMART zpr1 252 412 IPR004457 GO:0008270
Adu04g01322 722 SMART zpr1 508 673 IPR004457 GO:0008270
Adu04g01322 722 Gene3D ZPR1, zinc finger domain 498 553 IPR042452 -
Adu04g01322 722 Gene3D ZPR1, zinc finger domain 244 297 IPR042452 -
Adu04g01322 722 PANTHER ZINC FINGER PROTEIN ZPR1 226 718 IPR040141 -
Adu04g01322 722 Coils Coil 348 368 - -
Adu04g01322 722 Pfam ZPR1 zinc-finger domain 252 411 IPR004457 GO:0008270
Adu04g01322 722 Pfam ZPR1 zinc-finger domain 508 671 IPR004457 GO:0008270
Adu04g01322 722 Gene3D ZPR1, A/B domain 554 701 IPR042451 -
Adu04g01322 722 Gene3D ZPR1, A/B domain 298 439 IPR042451 -
Adu04g01322 722 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 509 618 IPR004457 GO:0008270
Adu04g01322 722 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 254 434 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01322 Adu-Chr4 33287969 33297547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01322 224 721 C2H2 Transcription Factor Family AT5G22480 73.146 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01322 K06874 - gmx:100798741 828.55