Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01308 ATGGACAGAGGCGGTTATAATCAGAGACGTGGTGGTGGTAACGCCAGAGGCAACGGAAGAGGAGGCCGCATGAGAGGAAGAGCAAGAGGAAGAAACTTTTCCCAACCCCCACGGCAACCGGCTGACAGTGGCGTAGGAAGAGGCACCGCCGGCAGAGGATTTTATCCGCAGCCACCACCACCACAGTGGCAGCCAAGGCAGCAGAACACCATCTCCGGGGGCACATCAACCGCAACCGGCAGCGGAACCGCACCTCCAAGTCTCGTTTCCCCTCCGTCAAACCCTCCTCCTCCCACTCAAAAAGTTGTTCCGGTTGCCGGAATGGGAACGATTGGAACGTCTTCAGACTCCAATGAAACGATCTCACCCATTCAGAGGCCCGACGCCGGTGGCACGGTGGCGGTTAGGATCAAGACTCTTCAGGTGAACCATTTTCCAGTGAAATTCAACCCAGAGAGCAGGATCATGCACTACAATGTCGATGTGAGTCCCCAATCGCCGCCACAACCAGGCCGTCCACCGAGGAGGATATCAAAGACCGAACTGTCATTGATCCGTGACAAGTTGTTCCTTGACCATCCGGAGCTGCCGCTAGAGATGACTGCCTACGATGGTGAGAAGAACATTTTTAGCAAGGTTAGTTTGCCCGAAGAGGCTTTTGTGGTGGAAGTGTCCAAGGGAGAGGACGAGAGGCCCACAGGATTCAACGTGACGTTGACTCTAGTCAACATTCTTGAGATGAGTAGGTTGGAGGATTACATCAGAGGCAGGGCATTGTCAATCCCCAGAGTGATCTTGCAGGGTGTGGATGTGGTCTTCAAGGAGAATCCAACAAAATGTACTGTTCCGGTTGGTCGCTGCTTCTACCCAATGAACCCGAAATTTAGAGAGACGAATCTTCAGCCTGGTGTGATTGCTGTTGGAGGGTTTCAGCATAGTCTCAAACCAACCCGTCAAGGACTGTCATTGTGCTTGGATTATTCGGTTTTGTCTTTCAAGAAAAAAATGCCAGTGCTGGATTTCCTTCATCAACAGATTACCGGTTTCAATTTGCGCGAATTCGGAAGGTATCAGATTGATATCAGGTACAAGGACATCCCTGCATTGGATTTTGGAGGTAACAAGACCAACTATGTGCCAATGGAACTTTGTGTCTTGGTTGAGGGTCAGAGGTATCCCAAAGAGTATTTGAGTAAGGATGCTGCGAAGAATTTGAAAGATATGTGCCTGCCTCCACCGAGAGTGAGGCAAGCTGCAATACAGGATATGGTGAATTCAAGATGTGGACCCTGTGGGGGTGGTATCGTTGAAAATTTTGAAATGAATGTCAGCAATGCTATGACAACAGTGACTGGCCGTGTACTTGGACCCCCAAAACTGAAGCTTAGCGATCCAAGTGGCAGGACTATCCAGATGGCATTGACTCCAGAGAAGTGCCAATGGAATTTAGTTGAGAAGTCAATGTTTGAAGGTAAGTCAGTTGAGTGTTGGGGCATTCTTGATTTCACCTTCCGCAGTAAATGTATCTTTAGCGGTCAAAGATTCATTTCTAAGCTTATTGAGAAGTACGATAAATTTGGCATCATCATGAAGGAGCCAGTTTGGATAGAAAAAACAGACATGTTGAAACTTGGCAACTATAATCAGCTTTCTGACTTACTTGAAAAGATTAATGATGAGGTTTTCAGAAAATGTAGATGCCGGCTGCAATTTCTTCTGTGTGTAATGGCCTACAAAGATCCAGGTTACAAGTGCCTCAAGTGGATTGCTGAGACCAAGGTCGGCATTGTGACACAGTGCTGCTTGTCGGGTAATACTAATTCTGCAAAAGATCAATATCTTACTAATCTTGCTCTCAAGATCAATGCGAAAATTGGAGGCAGCAATGTGGAGCTTATTAATAGGCTTCCTCACTTTGAGGGCGATGGTCATGTTATGTTTATCGGGGCTGATGTAAATCATCCGGCTTCCAGAGATGCAAATAGTCCATCAATGGCTGCTGTGGTTGCCACTGTTAATTGGCCGGCTGCAAACCGCTATGCTGCTCGAGTTTGCGCTCAAGAGCATCGAACTGAGAAGATTTTGAACTTTGGAGAAGTTTGCCTTGAGCTTGTTTCATGTTATGAAAGGCTGAATGGAGCCAAGCCTGAAAAGATTGTTATCTTCCGTGATGGGGTCAGTGAAAGTCAATTTCAGATGGTTCTTGGTGAAGAGCTTCAGGATTTGAAGAGGACCTTTGAACGTGCAAATTACTCCCCAACCATTACTCTTATTGTGGCACAAAAGCGACACCAGACTCGACTCTTCCCTTCTCCTCCTGATAATGAGACGACGTCTGCTACTCGCGGCAATGTGTTGCCTGGAACAGTAGTGGATACAGTCATCATCCACCCCTTTGAGTTTGACTTTTATCTGGTTAGTCACCATGGAAGCCTGGGAACAAGCAAGCCCACTCATTACCATGTCTTGTGGGATGAGCACGATTTCACGTCAGATAAACTCCAGGAACTGATATATGACATGTGCTTTACGTTTGCGCGGTGCACGAAACCTGTGTCTTTAGTCCCTCCGGTGTACTATGCTGACCTTGCTGCATACAGAGGACGACAATACTATGAAGCAAAGATTGGGATGCAATCTCCGTATTCAGCTACATCTTCTTCATCATCACCTTTGGCTTCTTCATCCGTTTCTTCAGCTACTTCAAATTCGAATGATATGGACTTCTACAAGCTGCATTCTGATCTGGAAAATATAATGTTCTTCATCTAA 2772 0.4683 MDRGGYNQRRGGGNARGNGRGGRMRGRARGRNFSQPPRQPADSGVGRGTAGRGFYPQPPPPQWQPRQQNTISGGTSTATGSGTAPPSLVSPPSNPPPPTQKVVPVAGMGTIGTSSDSNETISPIQRPDAGGTVAVRIKTLQVNHFPVKFNPESRIMHYNVDVSPQSPPQPGRPPRRISKTELSLIRDKLFLDHPELPLEMTAYDGEKNIFSKVSLPEEAFVVEVSKGEDERPTGFNVTLTLVNILEMSRLEDYIRGRALSIPRVILQGVDVVFKENPTKCTVPVGRCFYPMNPKFRETNLQPGVIAVGGFQHSLKPTRQGLSLCLDYSVLSFKKKMPVLDFLHQQITGFNLREFGRYQIDIRYKDIPALDFGGNKTNYVPMELCVLVEGQRYPKEYLSKDAAKNLKDMCLPPPRVRQAAIQDMVNSRCGPCGGGIVENFEMNVSNAMTTVTGRVLGPPKLKLSDPSGRTIQMALTPEKCQWNLVEKSMFEGKSVECWGILDFTFRSKCIFSGQRFISKLIEKYDKFGIIMKEPVWIEKTDMLKLGNYNQLSDLLEKINDEVFRKCRCRLQFLLCVMAYKDPGYKCLKWIAETKVGIVTQCCLSGNTNSAKDQYLTNLALKINAKIGGSNVELINRLPHFEGDGHVMFIGADVNHPASRDANSPSMAAVVATVNWPAANRYAARVCAQEHRTEKILNFGEVCLELVSCYERLNGAKPEKIVIFRDGVSESQFQMVLGEELQDLKRTFERANYSPTITLIVAQKRHQTRLFPSPPDNETTSATRGNVLPGTVVDTVIIHPFEFDFYLVSHHGSLGTSKPTHYHVLWDEHDFTSDKLQELIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRQYYEAKIGMQSPYSATSSSSSPLASSSVSSATSNSNDMDFYKLHSDLENIMFFI 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01308 923 SMART Piwi_a_2 571 873 IPR003165 GO:0003676
Adu04g01308 923 Pfam Argonaute linker 1 domain 283 332 IPR014811 -
Adu04g01308 923 MobiDBLite consensus disorder prediction 110 125 - -
Adu04g01308 923 Pfam N-terminal domain of argonaute 139 272 IPR032474 -
Adu04g01308 923 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 356 922 - -
Adu04g01308 923 Pfam PAZ domain 356 400 IPR003100 GO:0005515
Adu04g01308 923 ProSiteProfiles Piwi domain profile. 571 873 IPR003165 GO:0003676
Adu04g01308 923 SMART DUF1785_2 282 335 IPR014811 -
Adu04g01308 923 MobiDBLite consensus disorder prediction 88 102 - -
Adu04g01308 923 Gene3D - 454 633 - -
Adu04g01308 923 MobiDBLite consensus disorder prediction 66 87 - -
Adu04g01308 923 Gene3D paz domain 328 391 - -
Adu04g01308 923 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 110 357 - -
Adu04g01308 923 ProSiteProfiles PAZ domain profile. 356 388 IPR003100 GO:0005515
Adu04g01308 923 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 110 357 - -
Adu04g01308 923 MobiDBLite consensus disorder prediction 1 127 - -
Adu04g01308 923 SUPERFAMILY PAZ domain 355 425 IPR036085 GO:0005515
Adu04g01308 923 Pfam Piwi domain 572 872 IPR003165 GO:0003676
Adu04g01308 923 SUPERFAMILY Ribonuclease H-like 568 873 IPR012337 -
Adu04g01308 923 Gene3D - 641 923 IPR036397 GO:0003676
Adu04g01308 923 CDD Piwi_ago-like 435 872 IPR045246 -
Adu04g01308 923 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 356 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01308 Adu-Chr4 31804747 31808703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01308 357 922 Eukaryotic Initiation Factors Gene Family AT1G48410 36.379 3.67e-106 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01308 K11593 - jre:109006442 890.952