Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01297 ATGAAAGAGGGTGGTAGGAAGCAGGGTTCAGCCTCACCTTGTGCTGCATGCAAGCTTCTCCGCCGAAGGTGCGCCGCGGATTGCGTCTTTGCGCCGTATTTCCCGGCCGACGAGCCTCACAAGTTTGCAAATGTGCATAAGGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGAGCTACCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTTTATGGCTGTGTGGGAGCCATCTCTTCTCTTCAACAACAAATTGATGCGTTGCAAATCCAATTGGCTGTGGCTCAGGCTGAGGCTGTGCATCTCAGGGTGCGCCAGACCCAGACTGCATCCTGCTCTTACTGGACCCAACCCCATAGCCCAACCAATAGTGCCTCCCCATCCTCCAAGCCCATTTTTGACATCGACATGGGCCTTGACCATACCTCTTATGCAGATTCTATGTGGTCATGA 495 0.5293 MKEGGRKQGSASPCAACKLLRRRCAADCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQIQLAVAQAEAVHLRVRQTQTASCSYWTQPHSPTNSASPSSKPIFDIDMGLDHTSYADSMWS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01297 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 138 - -
Adu04g01297 164 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Adu04g01297 164 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Adu04g01297 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 138 - -
Adu04g01297 164 Coils Coil 92 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01297 Adu-Chr4 31077373 31081724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01297 1 164 AS2 family AT1G31320 69.591 2.58e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu04g01297 LOB 1.5e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01297 - - gmx:100802822 231.876