Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01294 ATGGAGTTCGAGGTGAAGCTTGTTGCCGCCATCGACAATTGCTTCGTCTCCCTTCCCCTCCCTCTCATCCAAACTCTCCAATCCACGCGCTCCTCTCCTCTCCCTCACATACTCGCCCTCGACCTCTGGTTCGTCGCTTGGTCCGGCGCCACTTCTTCTTCTCCCTCCGCCATCGAGGTTTCGAAACAATTTGCGGAGTGCATTTCGTTGCCGAATCACGGTACTGTTCAGGTGAGAGCTGCTTCCAATGTGGCTCATGCTTCTCTTGTTACGATAGAGCCTCACACCGAGGATGATTGGGAGGTTTTGGAACTCAATTCCGAACAAGCTGAGGCTGCTATCCTCAACCAGGTCAGGATTGTTCATGAAGGGATGAGATTTCCTTTGTGGTTACATGGTCACACCGTCATCACATTCCATGTCACTTCTGTTTTCCCGAAGAAAGCGTACAACTCATGCCAGGAACTGAAGTTGCCGTTGCTCCCAAAAGGCGATCTAGAATCCTGTGATAAGGAACAAACTGCAAAGATGCTTCTCCGTATACAAGATCCAGGGGTATTATGTCATACCAGAACTGATGTCAAAGGTGTTGAGCTCCATATGGGGCTCACTTCTGTTGTTTTTGTTCACCCAGAAACAGCCAAGCACTTCTCTTTTAACATGCTTCAGCCAGTTTCCTTAGTACCAAGAATATCCAAGGAGAATGCCAATATTTCGAAAACTAATGTTTTGAAATCCAAAGGCGGGTCACCTGGCAATGAAGTTGAGAATGGAAATTTAACTGACAAGAAACAACATCGACAAGCTGTTGTTCATCTCTTATTTTCAGAATCTGTGGCTGCAGGGCATGTGATGTTAGCCAAGTCTCTTCGCCTCTATTTGAGAGCTGGCCTACATACATGGGTTTATTTGAAAGCATATGATATCATTAGGGAGAAAAGTATTCCATCCATCACTTTTTCTCCTTGTCAATTCAAACTATTAAAGCAGGATAGTTCTGCTGAGAAAGATGGTCTGGATAGCCACAATAATCACATGAATGGAAAATTACTTGCGAAATCTATGTCAGGTGACTTTGTGGACCCTATAGATTGGTCAATTAACAATGAAGTTGTTGCAGCTCTTTCTGATGAATCCAACTGCAAAGCAGAGGAAGAGAATGCAAATCAGTCTCAGAATCAAAAGGGGATAAAGAGTCTTGTTCGGCTGTGGTATATTGCACAACTTGAGGCAATTACTTCTATTACGGGTGTAGAGGTTAATTCATTGGTCATGTGTAGCCAAACTTTGCTTGATTTCAAATTAAACTGTCACAACCTTGGGGATAATGGGAGAGCTCCCCTACCTTATAATTCTTCAGAGAATAGTGGCAAGACTGCTGAAGTGTTATTTATTTTGACTTTTGGTGATGAACATCTGCATCATGGGAAACCTAATGCATACAAAGTTGCTCTTGGTAAAAGCCTTAAAAGTATCAATATAGGCGATCTGCAGCTTTTTGAAGGGATGAAATTGGGTGATCCCGTGTCTATTCATTCTATTGAAGAGACAGCATCTCAAGAGCACATTAGTTCAAATGTATCTTTACTTAGCTGGATGGAGAAACCAGCTTCTGATATTATTAATCGGATGTTGGTATTGTTATCTTTGAAGTGTGGTCTGTGGTTTGGTTCATGCAACTTGCCACTCCCTGGACATGTTTTAGTACACGGACCACCAGGCTCTGGGAAAACTTCATTATCAAGGGCTGTAGCCAAATCCCTTGAGAATCATAAAGATATCTTAGCACACATAGTTTTTGTGCCCTGCTCAAAACTTTCTTTGGAGAAGGTCCCAATAATTCGCCAAGAACTTACAAACCATGTAATGGAAGCTTTAAACCATGCGCCCTCCATCGTAATCTTTGATAATCTTGATAGCATAATTTCAACTTCTGATTCCGAAGGATCTCAGCCCTCAACATCTGTTGCTGGACTCTCAGATATTTTGGTTAACATCATTGATGAATATAGGGAGAAGAGGCAAAAATCATGTGGATTTGGACCGGTCGCCTTCATAGCTTCCATACAGTCACTGGAGAAACTGCCACAGTCTTTGAGCTCTTCAGGACGCTTTGATTTCCACATACAGTTGCCAGCTCCTGCAGCTTCAGAGCGTAAAGCTATGTTGAAGCATGAAATTGAAAGGCGTCACTTGCAATGTGGTGAAGACATCCTACTGGATGTGGCTGTCAAATGTGATGGTTATGATGGCTATGATCTGGTATTCCAATTAGTCATTAATTCGTTATTTCCATGGTTTCACCTGCATTTCGCTGTTCATCGATTTTTGCCATCAAATGCTGCCAATAATGAGCACGAGAGTCCTGCTTTACTAAGAGAGGATTTCTCCCAGGCAATGCATGGTTTTCTTCCAGTTGCAATGCGTGACATCACAAAGTCTGCATCTGATGATGGTCGTTCTGGATGGGATGATGTGGGTGGCCTCGTTGACATCCGAAATGCTATTAAGGAGATGATAGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCACAAGCACCATTGAGGTTGAGGTCAAACGTCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATTGTGGGTGCTGCTGCGGCTGCTTCATCGCTTCGATTCATATCAGTGAAAGGACCAGAGCTGTTGAACAAGTATATTGGTGCTTCTGAACAAGCCGTTAGGGATATATTCTCTAAAGCAGCAGCAGCAGCTCCTTGCTTACTATTTTTTGATGAGTTTGATTCTATTGCTCCTAAGAGAGGGCATGACAATACTGGAGTAACTGATCGTGTCGTTAATCAATTTCTGACCGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTATTTGCTGCTACAAGTAGACCGGATTTACTTGATGCGGCACTGCTGAGACCTGGTAGGTTAGATCGACTTCTTTTCTGTGATTTTCCATCTTGGCATGAGAGATTGGAAATTCTGACTGTTCTTTCTAGAAAGTTACCAATGGCGCATGATATAGATTTGGCCACAGTAGCTAAAATGACTGAGGGATTCAGTGGAGCTGACCTCCAAGCTCTCCTCTCAGATGCACAGCTCGCAGCAGTCCATGAAGTTCTGGACAATTTGGGTGCCTCTGCGCCGGGTAAAGCACCAGTTATTACAGATGCTTTACTGAAGGCCACTGCCTTGAAGGCTAGACCATCTGTTTCAGAAGAAGAGAAAAGGAGACTCTACAGTATCTATGGCCAGTTCCTGGATTCAAAGAGATCTGTTGCTGCTCAGAAAAAGAAAAGAGAGAGAAAGAAAATCGAAGGCCACGAAGCTCGCATCGCTTCCCAGAAGAAGACGACGCTTCCCAGCTGTTCCGTTTTGGAATCATTCTGCTACATGATGCTGAAGAAGTGA 3429 0.4342 MEFEVKLVAAIDNCFVSLPLPLIQTLQSTRSSPLPHILALDLWFVAWSGATSSSPSAIEVSKQFAECISLPNHGTVQVRAASNVAHASLVTIEPHTEDDWEVLELNSEQAEAAILNQVRIVHEGMRFPLWLHGHTVITFHVTSVFPKKAYNSCQELKLPLLPKGDLESCDKEQTAKMLLRIQDPGVLCHTRTDVKGVELHMGLTSVVFVHPETAKHFSFNMLQPVSLVPRISKENANISKTNVLKSKGGSPGNEVENGNLTDKKQHRQAVVHLLFSESVAAGHVMLAKSLRLYLRAGLHTWVYLKAYDIIREKSIPSITFSPCQFKLLKQDSSAEKDGLDSHNNHMNGKLLAKSMSGDFVDPIDWSINNEVVAALSDESNCKAEEENANQSQNQKGIKSLVRLWYIAQLEAITSITGVEVNSLVMCSQTLLDFKLNCHNLGDNGRAPLPYNSSENSGKTAEVLFILTFGDEHLHHGKPNAYKVALGKSLKSINIGDLQLFEGMKLGDPVSIHSIEETASQEHISSNVSLLSWMEKPASDIINRMLVLLSLKCGLWFGSCNLPLPGHVLVHGPPGSGKTSLSRAVAKSLENHKDILAHIVFVPCSKLSLEKVPIIRQELTNHVMEALNHAPSIVIFDNLDSIISTSDSEGSQPSTSVAGLSDILVNIIDEYREKRQKSCGFGPVAFIASIQSLEKLPQSLSSSGRFDFHIQLPAPAASERKAMLKHEIERRHLQCGEDILLDVAVKCDGYDGYDLVFQLVINSLFPWFHLHFAVHRFLPSNAANNEHESPALLREDFSQAMHGFLPVAMRDITKSASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMAHDIDLATVAKMTEGFSGADLQALLSDAQLAAVHEVLDNLGASAPGKAPVITDALLKATALKARPSVSEEEKRRLYSIYGQFLDSKRSVAAQKKKRERKKIEGHEARIASQKKTTLPSCSVLESFCYMMLKK 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01294 1142 PANTHER AAA-FAMILY ATPASE 3 1109 - -
Adu04g01294 1142 SMART AAA_5 563 715 IPR003593 -
Adu04g01294 1142 SMART AAA_5 857 993 IPR003593 -
Adu04g01294 1142 SUPERFAMILY ADC-like 10 80 IPR009010 -
Adu04g01294 1142 Pfam AAA+ lid domain 1013 1049 IPR041569 -
Adu04g01294 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 757 IPR027417 -
Adu04g01294 1142 MobiDBLite consensus disorder prediction 242 258 - -
Adu04g01294 1142 Gene3D - 84 159 - -
Adu04g01294 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 823 1049 IPR027417 -
Adu04g01294 1142 Pfam Peroxisome biogenesis factor 1, N-terminal 90 148 IPR015342 GO:0005524|GO:0005777|GO:0007031
Adu04g01294 1142 PANTHER - 3 1109 - -
Adu04g01294 1142 MobiDBLite consensus disorder prediction 242 262 - -
Adu04g01294 1142 Gene3D - 517 735 IPR027417 -
Adu04g01294 1142 ProSitePatterns AAA-protein family signature. 961 979 IPR003960 GO:0005524|GO:0016887
Adu04g01294 1142 Pfam ATPase family associated with various cellular activities (AAA) 567 712 IPR003959 GO:0005524|GO:0016887
Adu04g01294 1142 Pfam ATPase family associated with various cellular activities (AAA) 861 988 IPR003959 GO:0005524|GO:0016887
Adu04g01294 1142 Coils Coil 1104 1124 - -
Adu04g01294 1142 Gene3D - 822 1083 IPR027417 -
Adu04g01294 1142 SUPERFAMILY Cdc48 domain 2-like 86 149 IPR029067 -
Adu04g01294 1142 CDD AAA 827 990 - -
Adu04g01294 1142 CDD AAA 561 712 - -
Adu04g01294 1142 Gene3D - 992 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01294 Adu-Chr4 31010686 31022474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01294 564 754 Calmodulin-binding Proteins AT3G56690 31.250 1.60e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01294 K13338 - gmx:100803882 1661.74