Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01292 atgagGCTTAGTATCTCTTATTTTACACCATCTCCTCCAGACTTGCAGCACAAAATGAGTACGTCAAACTCAAAAGTGAACTTCATTGCAAGTAGTTCTGGAGTTGTAATAGAAAACATAGCTCCATTGAAAACCGTGTCCGGTCCTACAACAAATTTACCGGGGGATGAAGACATTCAACCACTTTCAGGATGCCCATTCTATCATGTGATTATTTCAAAATCACATATTTATCCTGCTTTTAGCATGCCGGTTTCAAACGAATTAGCACTTCCTTCAGCTGTAGTCCCAGCTATTCTCAAGTATGGAAGCAAGAGCTGGGACATACAGTATTGCGGACTAGGCAAAAGTTACAACAAGTTCTTTAACCACAGAGGCTGGAAAAAATTTGCTGTTGATAATCATTTGGAGGTTGGGGACGCTTGCGTCTTTGAACTCAAGGAGTCGAGTGAAGAGAAACTTGTCTTCCAAGTTCAAATTCTTAGAGGTGACCTCCCTGAAACTTTTCTTAAAAGGAAAGAAAAAGAGAAGGAAAAGAAAAAGGCCAGGGCCAAGATTGCAGAAAAGCCAGGAGGTAAAAGTGCAGAAAACCGCAACAGTGCAGAAATGCCAATTCTCATTGACTAG 627 0.4067 MRLSISYFTPSPPDLQHKMSTSNSKVNFIASSSGVVIENIAPLKTVSGPTTNLPGDEDIQPLSGCPFYHVIISKSHIYPAFSMPVSNELALPSAVVPAILKYGSKSWDIQYCGLGKSYNKFFNHRGWKKFAVDNHLEVGDACVFELKESSEEKLVFQVQILRGDLPETFLKRKEKEKEKKKARAKIAEKPGGKSAENRNSAEMPILID 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01292 208 ProSiteProfiles B3 DNA-binding domain profile. 104 164 IPR003340 GO:0003677
Adu04g01292 208 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 31 176 IPR044837 -
Adu04g01292 208 SUPERFAMILY DNA-binding pseudobarrel domain 64 162 IPR015300 -
Adu04g01292 208 Gene3D - 57 164 IPR015300 -
Adu04g01292 208 MobiDBLite consensus disorder prediction 172 192 - -
Adu04g01292 208 MobiDBLite consensus disorder prediction 172 208 - -
Adu04g01292 208 Pfam B3 DNA binding domain 103 158 IPR003340 GO:0003677
Adu04g01292 208 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 31 176 - -
Adu04g01292 208 SMART B3_2 68 164 IPR003340 GO:0003677
Adu04g01292 208 CDD B3_DNA 105 162 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01292 Adu-Chr4 30938977 30944071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01292 71 167 REM Transcription Factor Family AT4G33280 30.928 9.07e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu04g01292 B3 4.8e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01292 - - adu:107484003 363.229