Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01247 ATGGGAGGTGATTTATACCTGCGGGGACGGGGGATGGGGCCCCGTATAATAAACGGAGCGGGGGCAGGGGTAGAGTCCCTCTCCTTCTCAAACACCGTTGAGTGCCGACTGTTGACCACCGACCGCCGACCGCCGCCTCCCACCTTCTGTGTCCCTCAGCGTCGCAGTCTCGTCTCGTCTCCTCTCCACTCCTCCTCAAAGTTCAAACCCTCAGTCCCTTCTGTCTCCTTCCCAAACACTGCCAACCGCTGCCTCCCACGACCCAGCGCCGCCTCCCACCTCCTGAGTGGCTCGGTCTCTCACAAGAGATCCCGAGCTTACCGTCGCTGGTCGTCATCTTCTCATCTTCGCCGTTCGTCCGCCAAATTGCCGGTCTTTCCTGTGGTTTCTACGTCGGGGTTCCATGAACTGAGGAGGAACAGAATATTTTTACTTGGATTACAAAAGTTGGGCAAAGGTGATTGGCGTAGAATTGCAAGAAACTATGTTATATCAAGGACCCCTACTCAGGTGGCCAGTCACACTCAAAAGTATTTCATCAGGAAAAACAATGTGTTTAGACAGAAAAGACGCACCAGCTTGTTTGACATTGATGCAGATGAAGTTTTTACTCTTGTCTACAATTACTATCCATGA 636 0.522 MGGDLYLRGRGMGPRIINGAGAGVESLSFSNTVECRLLTTDRRPPPPTFCVPQRRSLVSSPLHSSSKFKPSVPSVSFPNTANRCLPRPSAASHLLSGSVSHKRSRAYRRWSSSSHLRRSSAKLPVFPVVSTSGFHELRRNRIFLLGLQKLGKGDWRRIARNYVISRTPTQVASHTQKYFIRKNNVFRQKRRTSLFDIDADEVFTLVYNYYP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01247 211 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 140 182 IPR006447 GO:0003677
Adu04g01247 211 CDD SANT 141 174 IPR001005 -
Adu04g01247 211 PANTHER TRANSCRIPTION FACTOR KUA1 141 202 - -
Adu04g01247 211 Gene3D - 138 185 - -
Adu04g01247 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 183 IPR017930 -
Adu04g01247 211 PANTHER OS01G0187900 PROTEIN 141 202 - -
Adu04g01247 211 SUPERFAMILY Homeodomain-like 140 184 IPR009057 -
Adu04g01247 211 Pfam Myb-like DNA-binding domain 143 179 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01247 Adu-Chr4 28558604 28559782 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu04g01247 Myb_DNA-binding 1.6e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01247 - - nnu:104610453 107.457