Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01230 ATGTCTGATAGTGAGTTGGATTTGGATGATGGTAGCACGTTAGAGTTTTTAGGCCATTGGACTGATGGTTGGAGCACCGATTTGGGAGATGGGGATGATTTGAACTGGTTGGAGGAACCACTGACTGAGGAAGGGGATAGTGGCCATGCAGATAGTGAATACGAAGGCAAGGATGGTGATGGAAGTGATATGCATGCTTCCGCAGAGAATCATGCAAACTCTGAGAATGTCATGGAATTTAATGGGATTGGAGATGCGTATGCAAGCTATGTAGCGTATGCAAAGGGTATTGGTTTTGCGGTGCAAAAGGGAGATTCTATTAAAGACGAGGACGGGAATATTGTTAGGAAGTTTTTCTACTGCAATCGGCAAGGGCAGCATGAAAAGAAGCATTACGAGCGAGTTGACAGAAAAAGGACTCATAAACCAGAGACGAGAACGAATTGCGATGCCAAGCTTATGGTGTTTCTGGACAAAATTTGTGGGAAATGGCGGACGAAAATATTGGTCGAGGAACATAATCATGAGTTGGCGCCCCAAGAGTTCACTAATATCATGGCTTCACATAGGAAGATCCCAGAAGGGCACAAAGTGCATATACATAGAATGCATGAAGCTGGGCAATCCAGAATCGTCGAAGGAGATGTAGCCGTAATCATAAGCTACTTGAAGGGCAAGGCTGAGTTGGATCCGATGGCAGTTGTGCAGTACTCTTATTGCGCTGAGAAGCACCTTGGGTACCTATTTTGGTCAGATGGTAACATGCAGCATGACTATGAATGCTTTGGTGATGTGTTAGCATTTGACTCGACGTATAGAAAAAGCTTATATAACAGATCTCTTGTGATATTTTCGGGCACCAACCATCATAGACAAACAATTAATTTTGGGTTTGGTTTGCTAGAGGATGAGAAGATTTCGTCCTACAAATTGTTGTTAAGTAGCTTTTTGGAGGTAATGACACACAAGCAGCCGAAATTCGTTGTCACAGATGGTGATGAATCCATGCGAGAGGCCATTAGATGTGAATTCCCTAACGCGACACATAAACTATGCACCTGGCATCTTGCTCGAAATGCAGTTTTATTGGGTGGACACGATCACGTTATTCAGTGTCGAGGACAACGATTGGGTCGCAAAGACATACAAAAAGAGAGAGAGATATGGGCAAATTCTTATTTGTGTGAGAAGTTTTGTGCTGGTATTCGAACCACTTCTCGGTGCAAGGGTATTAATTCATCACTTAAGAAATTTATTAAGTCCGGGAATTGCTTACTTGAGTTGGTCGAGAATCTGGATCGAGTAGTTAAGGATTACCGGAATAACAAGTTCATTGCGGATTACAAGACTCTTTATTCAAATCCGATGATGACAACGGGTCTCGAAACATTGGAAAGATCTGTGAGCAAGTTATACATGAAGGAAATATTCTATGAGGTGCAAAAACAGATCGAGGGAATTGGGGCATTGTTAGTGTTGCACAATTGGTGGCACCGAGAACTTCATGTTCTAAAAGCATTGAAAGTCCCATCATGTGTACTCGGTTTTCATGGATAG 1557 0.4265 MSDSELDLDDGSTLEFLGHWTDGWSTDLGDGDDLNWLEEPLTEEGDSGHADSEYEGKDGDGSDMHASAENHANSENVMEFNGIGDAYASYVAYAKGIGFAVQKGDSIKDEDGNIVRKFFYCNRQGQHEKKHYERVDRKRTHKPETRTNCDAKLMVFLDKICGKWRTKILVEEHNHELAPQEFTNIMASHRKIPEGHKVHIHRMHEAGQSRIVEGDVAVIISYLKGKAELDPMAVVQYSYCAEKHLGYLFWSDGNMQHDYECFGDVLAFDSTYRKSLYNRSLVIFSGTNHHRQTINFGFGLLEDEKISSYKLLLSSFLEVMTHKQPKFVVTDGDESMREAIRCEFPNATHKLCTWHLARNAVLLGGHDHVIQCRGQRLGRKDIQKEREIWANSYLCEKFCAGIRTTSRCKGINSSLKKFIKSGNCLLELVENLDRVVKDYRNNKFIADYKTLYSNPMMTTGLETLERSVSKLYMKEIFYEVQKQIEGIGALLVLHNWWHRELHVLKALKVPSCVLGFHG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01230 518 Pfam MULE transposase domain 265 359 IPR018289 -
Adu04g01230 518 Pfam FAR1 DNA-binding domain 90 178 IPR004330 -
Adu04g01230 518 MobiDBLite consensus disorder prediction 31 67 - -
Adu04g01230 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 208 IPR031052 GO:0006355
Adu04g01230 518 MobiDBLite consensus disorder prediction 42 65 - -
Adu04g01230 518 PANTHER OS02G0262500 PROTEIN 384 493 - -
Adu04g01230 518 PANTHER OS02G0262500 PROTEIN 210 363 - -
Adu04g01230 518 PANTHER OS02G0262500 PROTEIN 77 208 - -
Adu04g01230 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 384 493 IPR031052 GO:0006355
Adu04g01230 518 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 210 363 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01230 Adu-Chr4 28032333 28034128 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g01230 MULE 7.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01230 - - adu:107470907 629.402