Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01227 ATGGCCAAATTGATCCAGTTGGGTACTTTTGATTTGAGCTATAATGAAATGTCTGGTGAAATTCTGGGTTGGATTGGCGGTTTGAATATACTCAATGAGCTTAATTTGGCACATAATAGGTTTAGTAGCACAATTCCAAAGGAATTAGGAAGGTTGTCTGAGCTTACTGTCCTTGATCTTTCTAGAAACCCTGAGCTATGTGTTAAAGGATTTGGGAAATGTCATAGCTCAAGGGGGAGAAAGTACCGGAGGTATGTGTGGATTTTCAGGTCCATATTTGCAGTTGCTGGAATCTTGTTCATCCTTGGGGTGGCTGTGTTTTATGTGAGATACAGGAACTTAAGAAACAAGAAGAGAAGTTTAAATGTTTCAAAGTGGAGGTTGTTTCATAAGTTGCGCTTTGATGAGTTTGAGATTGTTAAATTGATGAGTGAAGACAATGTGATAGGGAGTGGATCATCTGGGAAGGTTTACAAGGTTGTTCTAAGCAGTGGTGCTGTTGTAGCTGTCAAGAAATTATGGAGAGAAACCAAGAATGGTATCGGGATTGTTGGTTCTGAAAAAGATGATTTGATGTTGAAcgagtttggagcaaaagtggctgattttggagttgccaaaattGTTAATGGAACTAGCCAAGGGGCAGAGTCCATGTCTGTAATTGCAGGCTCTTATGGTTACATCGCACCAGAATATGCATATACTCTTCGGTTGAACGAAAAGAGTGATATTTACAGCTTTGGTGTTGTCATTTTGGAGTTAGTAACCGAAAGACCTCCTAATCATGCAGATTATGGGAAAAATGATCTGGTAAAATGGGTCTCATCCTTGTTGGAACAGAAAGGAATGGATCATGTGATTGATCCTGCCCTTGATTCAACATACAGGGAGGAAATCAGCAAGGTACTTAGTGTGAGGTTTCTCTGCACAAACGTTCTCCCTATAAACCGCTCTGCAATGTGGTGGGTGGTGAAAATGCTTCGGGAAGCAGCAACGGTTCCCAGATCCCGAAGCGTGAGGGAGGTAACACACTCCCCTTATTTTTCTTATCGTGAAAGAAGCATAGTTCGAGAACTTGTAAATATTTTGCATAGCTCCATCGGATGGAACCCTCCTATGAATGTCCCTACTCCCTACTCACTGTAG 1149 0.3986 MAKLIQLGTFDLSYNEMSGEILGWIGGLNILNELNLAHNRFSSTIPKELGRLSELTVLDLSRNPELCVKGFGKCHSSRGRKYRRYVWIFRSIFAVAGILFILGVAVFYVRYRNLRNKKRSLNVSKWRLFHKLRFDEFEIVKLMSEDNVIGSGSSGKVYKVVLSSGAVVAVKKLWRETKNGIGIVGSEKDDLMLNEFGAKVADFGVAKIVNGTSQGAESMSVIAGSYGYIAPEYAYTLRLNEKSDIYSFGVVILELVTERPPNHADYGKNDLVKWVSSLLEQKGMDHVIDPALDSTYREEISKVLSVRFLCTNVLPINRSAMWWVVKMLREAATVPRSRSVREVTHSPYFSYRERSIVRELVNILHSSIGWNPPMNVPTPYSL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01227 382 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 63 190 - -
Adu04g01227 382 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 191 334 - -
Adu04g01227 382 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 63 - -
Adu04g01227 382 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Adu04g01227 382 SUPERFAMILY L domain-like 3 68 - -
Adu04g01227 382 Gene3D Transferase(Phosphotransferase) domain 1 194 355 - -
Adu04g01227 382 Gene3D Ribonuclease Inhibitor 1 74 IPR032675 -
Adu04g01227 382 SMART serkin_6 143 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01227 382 Pfam Leucine rich repeat 7 64 IPR001611 GO:0005515
Adu04g01227 382 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 63 190 - -
Adu04g01227 382 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 191 334 - -
Adu04g01227 382 SUPERFAMILY Protein kinase-like (PK-like) 145 341 IPR011009 -
Adu04g01227 382 Pfam Protein kinase domain 197 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01227 382 Gene3D Phosphorylase Kinase; domain 1 132 193 - -
Adu04g01227 382 ProSiteProfiles Protein kinase domain profile. 1 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01227 382 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01227 Adu-Chr4 27865621 27867589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01227 191 350 Receptor kinase-like Gene Family AT1G28440 58.182 1.40e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g01227 Pkinase 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01227 - - adu:107483867 380.948