Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01200 ATGGCTTGTGAGGTTCTGATTCTCCAAAAAGAACTAGACGTGCTGACTGTTTGTAAACCTGCATCTGTCCCTGTAATGTATGGGGATCCTGAGAAACCAGCTCTGATCACTTATCCAGACCTAGCACTAAATTATATGTCATGTTTCCAAGGATTATTTTTCTGTCCAGAGGCAGCTTCTTTGCTGCTTCACAACTTCTGCATATATCATATCAGTCCTCCTGGACACGAAAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTTCTTTAGCACAGGCTTGGCAGAGGAAGGAGACTCCTGTTCTAGTTCAAGATTCTGCAAAGATTAAAGAAGCACCACCAGAATTTGATACTCGAAAAACAGATGAAAAATGGAAAAATATAAGGAGGCAGAGAAGCCTGAGGCAGAGGATCAATTCATGA 525 0.4286 MACEVLILQKELDVLTVCKPASVPVMYGDPEKPALITYPDLALNYMSCFQGLFFCPEAASLLLHNFCIYHISPPGHESWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSIKELQNLEKQLEGSLAQAWQRKETPVLVQDSAKIKEAPPEFDTRKTDEKWKNIRRQRSLRQRINS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01200 174 MobiDBLite consensus disorder prediction 146 163 - -
Adu04g01200 174 MobiDBLite consensus disorder prediction 146 174 - -
Adu04g01200 174 Pfam Ndr family 25 85 IPR004142 -
Adu04g01200 174 PANTHER PROTEIN NDL1 10 78 - -
Adu04g01200 174 Pfam K-box region 76 133 IPR002487 GO:0003700|GO:0005634|GO:0006355
Adu04g01200 174 Coils Coil 76 96 - -
Adu04g01200 174 Gene3D alpha/beta hydrolase 7 106 IPR029058 -
Adu04g01200 174 PANTHER N-MYC DOWNSTREAM REGULATED 10 78 IPR004142 -
Adu04g01200 174 ProSiteProfiles K-box domain profile. 76 174 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01200 Adu-Chr4 26391220 26394624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01200 77 165 MADS-box Gene Family AT2G45650 48.315 1.15e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01200 - - ahf:112719112 153.295