Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01174 ATGGAGTGGGACAGCAATTCCGATCTCAGCACCGATGACGACGAACCCTTCCTCCGCGGCGGCTCCAACGACGACGAAGATTTCGGTGTCGGACCTATCCCTTTCCCGGTTCTCCAAACCGCGCCGTGCGGCTTCGTGGTTACTGACGCGCTCGAACCTGACCAACCTATCATATACGTCAACACCGTCTTCGAGATGATTACCGGCTACCGTGCTGAGGAAGTTCTCGGTCGCAACTGCCGCTTTTTGCAGTGTCGAGGCCCATTTGCTAAGCGAAGGCATCCACTGGTGGACTCAACAGTAGTAGCAGAAATTAGAAGATGCCTCGAAGAAGGGGTTGAATTTCAAGGTGAGTTGCTGAACTTTAGGAAAGATGGATCTCCACTTATGAACAGACTGCGGCTGACACCTATATATGGAGATGATGAGATAACTCATGTCATTGGAATCCAGTTCTTCACAGAGGCAAACATTGATCTTGGTCCTCTTCCAGCTTCAACTAAGGAGTCTACTAAATCAGATCGTTTTCGATCCGTGCTTTCCTCATTGCATCCTCGTGAGGTGGGGGACCGAAATGTGACTCGTGGCCTCTGTGGAATATTGCAATTGAGTGATGAAGTAATTTCTCTCAAGATACTTGCTCGCTTAACTCCAAGAGATATTGCATCAGTTGGTTCTGTTTGTAGGCGTTTGTATGAGCTGACAAGAAATGAAGATCTATGGAGAATGGTGTGCCAAAATGCATGGGGATGTGAGACTACACGTGTTTTAGAGACCGTGCCTGGTGCAAGGAGACTTGGATGGGGTCGGTTGGCAAGGGAGTTGACCACACTTGAAGCAGCAGCATGGAGGAAACTGACCGTTGGAGGTGCTGTTGAACCCTCACGCTGTAATTTCAGCGCATGTGCAGTTGGCAACAGGGTTGTCCTATTTGGTGGTGAAGGAGTTAACATGCAACCTATGAATGACACCTTTGTATTAGATCTTAATTCTAGTAATCCCGAGTGGCAACACGTCCAGGTGAGCTCTCCTCCTCCTGGTCGTTGGGGCCACACACTTTCTTGTGTTAATGGTTCCCGCTTGGTTGTATTTGGAGGGTGTGGAAGGCAGGGCTTACTTAATGATGTCTTTGTTCTTGACCTGGATGCAAAGCCTCCAACTTGGCGAGAAATTTCTGGATTGGCACCTCCACTTCCTAGATCATGGCACAGCTCTTGCACTCTTGATGGTACCAAGTTGATAGTTTCTGGAGGCTGTGCTGATTCTGGAGTCCTCTTGAGTGATACTTTCCTCCTTGATTTGTCAATGGAGAAACCTGTCTGGAGGGAGATACCAGTGACATGGACTCCACCTTCTCGTCTAGGCCACACCCTTTCTGTTTATGGTGGTAGGAAAATATTGATGTTTGGGGGTCTGGCCAAGAGTGGACCACTGCGTTTTCGCTCAAGTGATGTATTCACGATGGATTTAAGTGAGGATGAACCGTGCTGGAGGTGTGTAACAGGGAGTGGGATGCCTGGTGCTGGAAACCCTGGGGGAATAGCTCCTCCTCCTAGGCTTGATCATGTGGCTGTTAGTCTTCCTGGTGGGAGAATTCTGATATTTGGTGGGTCCGTTGCAGGACTTCATTCTGCCTCCCAACTTTACATCCTTGATCCAACGGATGAGAAGCCAACATGGAGAATCCTAAATGTACCAGGGCGGCCTCCTAGATTTGCATGGGGACATAGCACATGTGTTGTTGGAGGGACAAGAGCTATTGTGCTCGGTGGCCAAACGGGGGAGGAATGGATGCTAAGTGAGCTCCATGAACTTTCCCTGGCAAGTTCT 1830 0.4923 MEWDSNSDLSTDDDEPFLRGGSNDDEDFGVGPIPFPVLQTAPCGFVVTDALEPDQPIIYVNTVFEMITGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVAEIRRCLEEGVEFQGELLNFRKDGSPLMNRLRLTPIYGDDEITHVIGIQFFTEANIDLGPLPASTKESTKSDRFRSVLSSLHPREVGDRNVTRGLCGILQLSDEVISLKILARLTPRDIASVGSVCRRLYELTRNEDLWRMVCQNAWGCETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01174 610 Pfam Kelch motif 520 567 IPR011498 GO:0005515
Adu04g01174 610 Pfam Kelch motif 453 504 IPR011498 GO:0005515
Adu04g01174 610 PANTHER ADAGIO PROTEIN 1-LIKE 1 610 - -
Adu04g01174 610 SUPERFAMILY PYP-like sensor domain (PAS domain) 41 151 IPR035965 -
Adu04g01174 610 Pfam Galactose oxidase, central domain 296 346 - -
Adu04g01174 610 ProSiteProfiles PAS repeat profile. 37 112 IPR000014 -
Adu04g01174 610 Gene3D - 274 476 IPR015915 GO:0005515
Adu04g01174 610 Gene3D - 198 244 - -
Adu04g01174 610 Gene3D PAS domain 35 162 - -
Adu04g01174 610 TIGRFAM sensory_box: PAS domain S-box protein 54 150 IPR000014 -
Adu04g01174 610 MobiDBLite consensus disorder prediction 1 23 - -
Adu04g01174 610 CDD PAS 41 143 IPR000014 -
Adu04g01174 610 Pfam PAS domain 42 151 IPR000014 -
Adu04g01174 610 Gene3D - 477 608 IPR015915 GO:0005515
Adu04g01174 610 SUPERFAMILY Galactose oxidase, central domain 283 597 IPR011043 -
Adu04g01174 610 Pfam F-box-like 208 246 IPR001810 GO:0005515
Adu04g01174 610 SUPERFAMILY F-box domain 191 261 IPR036047 GO:0005515
Adu04g01174 610 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 1 610 - -
Adu04g01174 610 Pfam Galactose oxidase, central domain 358 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01174 Adu-Chr4 24876346 24880700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01174 37 152 AGC Kinase Gene Family AT5G58140 34.188 3.94e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01174 K12115 - gmx:100802828 1124.77