Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01169 ATGGCGAGCACGCCGGACAACTCATGGGCAAAGGATCCAGCGGTGCCCACTTTTGTAGTTGTAATTTTTTCTGTGGCCGGCGGAGTTTCGGCGTTGGGCGTCCTAGTGGGTTTGTATTTAAAATGCCGCCGAAGTTTGAAGGAGGACATACCTAAGTTCCAGACGCATCACCAGCAACAACCACAATTTGCTACGCTCACTATAGAAAAATTCTTGAATGATATCGAAAGGGAGAAGCCAGTAAGATTCACTGATCAGCAGTTACAAATTGCAACCGATAACTACTCTAATTTGTTGGGGTCAGGAGGTTTCGGTGCTGTTTACAAAGGGATTTTCAATGGCGCCGTGGTAGCCGTGAAGGTCCTGCATGGAAATTGTGACAAAAGAAGTCAAGCACAGTTTATGGCAGAAATGGGAACACTTGGTAAAATCCACCATTTCAATCTTGTTCGGTTATATGGCTCTTGTTTTGAAGAAAACTTGACAGCATTGGTTTATGAGTACATGGGAAATGGATCTCTTGACAAGTATTTGTTAAAAGAAAACAAGACGTTAGGATTTGAAAAGCTTCATGAGATAGCGGTTGGAACTGCAAGAGGCATCGCTTATTTGCATGAAGACTGCCAACAAAGAATTATTCACTATGACATTAAACCGGCCAATATTTTATTGGACCGGAATTTCAATCCTAAGGTTGCGGATTTTGGTTTGGCAATGCTTTGTAACAGGGATAACACTCATATATCTATGACCGATGGAGGAGGAGGCAGGGGAACCCCCGGTTACGCTGCGCCGGAGCTATGGATGCCGTTCCCGGTGACTCACAAGTGCGATGTCTATAGCTTTGGAATGTTGTTGTTTGAGATCATAGGTCGGAGAAGAAATGTTGATAATAATGTTCCTGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAAATTTGATGCTGGAGAATTACAGGATTCAACATTAGTGTCTGAATTATTGTAG 993 0.431 MASTPDNSWAKDPAVPTFVVVIFSVAGGVSALGVLVGLYLKCRRSLKEDIPKFQTHHQQQPQFATLTIEKFLNDIEREKPVRFTDQQLQIATDNYSNLLGSGGFGAVYKGIFNGAVVAVKVLHGNCDKRSQAQFMAEMGTLGKIHHFNLVRLYGSCFEENLTALVYEYMGNGSLDKYLLKENKTLGFEKLHEIAVGTARGIAYLHEDCQQRIIHYDIKPANILLDRNFNPKVADFGLAMLCNRDNTHISMTDGGGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNVDNNVPESQEWFPMWVWKKFDAGELQDSTLVSELL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01169 330 SMART serkin_6 93 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01169 330 Gene3D Transferase(Phosphotransferase) domain 1 169 328 - -
Adu04g01169 330 Pfam Protein tyrosine and serine/threonine kinase 97 291 IPR001245 GO:0004672|GO:0006468
Adu04g01169 330 ProSiteProfiles Protein kinase domain profile. 93 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01169 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Adu04g01169 330 PANTHER RUST RESISTANCE KINASE LR10-RELATED 52 318 IPR045874 GO:0004672
Adu04g01169 330 SUPERFAMILY Protein kinase-like (PK-like) 78 313 IPR011009 -
Adu04g01169 330 PANTHER PUTATIVE-RELATED 52 318 - -
Adu04g01169 330 Gene3D Phosphorylase Kinase; domain 1 67 168 - -
Adu04g01169 330 ProSitePatterns Protein kinases ATP-binding region signature. 99 120 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01169 Adu-Chr4 24821673 24823474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01169 82 320 Receptor kinase-like Gene Family AT5G38280 41.935 1.32e-58 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Adu04g01169 PK_Tyr_Ser-Thr 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01169 - - gmx:100816921 451.825