Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01130 ATGGCGGATGCGGATAGGCCAGAGAAAGATTCCGGCGGCGGCGAAGAAACGAAGTACCGCGGCGTGAGGAAGAGGCCGTGGGGGAAGTATGGAGCCGAGATAAGGGATCCATCGAAGCCTACCGGAAGGATGTGGCTTGGGACATTCGACACGGCTGAGGAAGCCGCCAGAGCTTATGATCGAGCCGCCATTGCTTTAAGAGGTGGCCTTGCCATCCTTAATTTTCCGGATGAATATCATTCTCATCTCCCATTTATAGCTTCTTCTTCTTCTTCTTATTATTCTTCTACTTCTACTTCCACTTCCATTGGATCAAGTTCTTCTTCTTCCAGTGCACAACAACGTAGGGAAGTTATTGAGCTTGAATGTTTGGACAATAAGGTTTTGGAGGATCTTCTTGAAGAAGAAGAAAGGAACAGAAGGAAATACTAA 432 0.4722 MADADRPEKDSGGGEETKYRGVRKRPWGKYGAEIRDPSKPTGRMWLGTFDTAEEAARAYDRAAIALRGGLAILNFPDEYHSHLPFIASSSSSYYSSTSTSTSIGSSSSSSSAQQRREVIELECLDNKVLEDLLEEEERNRRKY 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01130 143 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Adu04g01130 143 PANTHER ETHYLENE RESPONSE FACTOR 3 137 - -
Adu04g01130 143 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Adu04g01130 143 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Adu04g01130 143 PANTHER DNA-BINDING DOMAIN 3 137 IPR044808 GO:0003700|GO:0009873
Adu04g01130 143 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Adu04g01130 143 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Adu04g01130 143 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Adu04g01130 143 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Adu04g01130 143 MobiDBLite consensus disorder prediction 90 115 - -
Adu04g01130 143 MobiDBLite consensus disorder prediction 1 22 - -
Adu04g01130 143 Coils Coil 126 143 - -
Adu04g01130 143 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01130 Adu-Chr4 22445805 22446236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01130 15 140 AP2-EREBP Transcription Factor Family AT3G23230 59.524 7.00e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu04g01130 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01130 - - adu:107483754 219.55