Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01096 ATGTTACCCTCCACAATCTCCCAACAACAATTCAGGTGGCTTCAACTTAATGGTTATTTTGGCGGCAATTGTATGCGCCTTCCTTTGCGCGCTAGGCCTCAACACCATGCTACAATGCACGCTACAATGCGCGAGTCGCGTCCTCACGGAGCCTTTACAATGGATTGCTTCCAGAGGGATCAACTCAGGGCTCAAGAAGAAAGAAATGGTTCTGCTAGTTGTGCAATTTGCCTAGCTGATTTCTCTGATGGAGACAAGATAAGGTTTCTTCCAAAGTGTAATCATCGTTTTCATGTGGCTTGCATTGATAAGTGGCTTCTTTCCCATTCCTCTTGCCCAACATGTAGGAACTTCCTCAAGTCCAATGATTCATCACACCCTTTTCATATTCTCATAGCTTAA 402 0.4478 MLPSTISQQQFRWLQLNGYFGGNCMRLPLRARPQHHATMHATMRESRPHGAFTMDCFQRDQLRAQEERNGSASCAICLADFSDGDKIRFLPKCNHRFHVACIDKWLLSHSSCPTCRNFLKSNDSSHPFHILIA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01096 133 SMART ring_2 74 115 IPR001841 -
Adu04g01096 133 Pfam Ring finger domain 73 116 IPR001841 -
Adu04g01096 133 PANTHER OS06G0666500 PROTEIN 51 121 - -
Adu04g01096 133 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Adu04g01096 133 SUPERFAMILY RING/U-box 66 124 - -
Adu04g01096 133 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 51 121 - -
Adu04g01096 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 126 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01096 Adu-Chr4 20822022 20822514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01096 33 119 C3H Transcription Factor Family AT2G17450 45.977 1.17e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01096 - K19040 ahf:112794746 127.872